DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wwox and firl

DIOPT Version :9

Sequence 1:NP_001285735.1 Gene:Wwox / 34090 FlyBaseID:FBgn0031972 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001033900.2 Gene:firl / 34627 FlyBaseID:FBgn0032405 Length:318 Species:Drosophila melanogaster


Alignment Length:133 Identity:39/133 - (29%)
Similarity:57/133 - (42%) Gaps:18/133 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 KDLHGRTALITGANCGIGYETARSLAHHG----CEIIFACRNRSSAEAAIERIAQERPAARSRCR 177
            ||:.|...||||...|||.|.|...|..|    |..|....|..:.|.| :|:......:.| | 
  Fly    51 KDVSGEIVLITGTGHGIGRELALHYASLGSTVVCVDIDGKNNLQTVEKA-KRLNLGEVYSYS-C- 112

  Fly   178 FAALDLSSLRSVQRFVEEIKQSVSHIDYLILNAGVFALP----YTRTVDGLETTFQVSHLSHFYL 238
                |:|....|....:.||..|..|..|:.|.|:  :|    ..::.:.::..|.|:..|.|: 
  Fly   113 ----DVSKRDEVTALADRIKSDVGCISVLVNNVGI--MPTHPILQQSAEEIQRVFDVNVFSQFW- 170

  Fly   239 TLQ 241
            |:|
  Fly   171 TIQ 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WwoxNP_001285735.1 WW 13..43 CDD:197736
WW 54..86 CDD:197736
PRK06196 104..402 CDD:235736 39/133 (29%)
human_WWOX_like_SDR_c-like 121..402 CDD:187669 37/129 (29%)
firlNP_001033900.2 adh_short 56..246 CDD:278532 36/128 (28%)
17beta-HSDXI-like_SDR_c 57..299 CDD:187598 36/127 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447649
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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