DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wwox and rdh14b

DIOPT Version :10

Sequence 1:NP_609171.1 Gene:Wwox / 34090 FlyBaseID:FBgn0031972 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001040655.1 Gene:rdh14b / 334665 ZFINID:ZDB-GENE-030131-6605 Length:323 Species:Danio rerio


Alignment Length:298 Identity:105/298 - (35%)
Similarity:160/298 - (53%) Gaps:33/298 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 LHGRTALITGANCGIGYETARSLAHHGCEIIFACRNRSSAEAAIERIAQERPAARSRCRFAALDL 183
            :.|:|.::||||||||..||..|......:|.|||:|..||.|...|..:...::.......|||
Zfish    39 MRGKTVIVTGANCGIGKATAAELLKLQARVIMACRDRQRAEDAARDIQNQAGTSQGEIVIKHLDL 103

  Fly   184 SSLRSVQRFVEEIKQSVSHIDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFYLTLQLETLFDY 248
            :||:||:||.||:.:....||.||.|||::..||::|.:|.|....|:||.||.||..|..|...
Zfish   104 ASLQSVRRFCEEVIREEPRIDVLINNAGLYQCPYSKTEEGFEMQLGVNHLGHFLLTNLLLDLLKQ 168

  Fly   249 K--TRIIVLSSESHRFANLPVENLAVHHLSPPPEKYWSMMAYNNAKLCNVLFAQELAQRWKQRGI 311
            .  :|::|:||:.:::.::..|:|      ...:.|.....|:.:||.|:||.:|||:|.....:
Zfish   169 SSPSRVVVVSSKLYKYGSINFEDL------NSEQSYNKSFCYSQSKLANLLFTRELARRLDGTEV 227

  Fly   312 SVFSLHPGNMVSSDLSRN----------YWFYRLLFAIVRPFTKSLQQAAATSIYCATANELTGL 366
            :|.:|.|| :|.:.|.|:          :|....|      |.||..:.|.|.:|.|.:.|:.|:
Zfish   228 TVNALTPG-IVRTRLGRHVNIPLLIKPLFWLVSWL------FFKSPLEGAQTPLYLACSPEVEGV 285

  Fly   367 SGLYFNNCFFCEPSKLSKS----AALQQQLWKLSENLI 400
            ||..|.||.  |...|||:    ||  ::||.|||:::
Zfish   286 SGKCFANCE--EEQLLSKATDDHAA--KRLWDLSESMV 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WwoxNP_609171.1 WW 13..43 CDD:197736
human_WWOX_like_SDR_c-like 121..402 CDD:187669 105/296 (35%)
rdh14bNP_001040655.1 Rossmann-fold NAD(P)(+)-binding proteins 41..315 CDD:473865 102/290 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.