DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wwox and Wwox

DIOPT Version :9

Sequence 1:NP_001285735.1 Gene:Wwox / 34090 FlyBaseID:FBgn0031972 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_006255728.1 Gene:Wwox / 292041 RGDID:1309927 Length:414 Species:Rattus norvegicus


Alignment Length:406 Identity:204/406 - (50%)
Similarity:269/406 - (66%) Gaps:14/406 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPDTDSEDELPPGWEERATDDGTVCYVNQQGKTSQWTHPRTGRSKRITGELPLGWEKYYDEQGKR 68
            |.|||||||||||||||.|.||.|.|.|...:.:||.||:||:.||:.|:||.|||:..||.|:.
  Rat     9 LDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQV 73

  Fly    69 FM--FLNKETQQRTNVDPRLAFAVEE-PTQNVAQVRQRFDSCSTALQVLHGKDLHGRTALITGAN 130
            |.  .:||.|   |.:||||||.|:: ||:  ...|||:|..:||:::|.|:|..|:..|:||||
  Rat    74 FFVDHINKRT---TYLDPRLAFTVDDNPTK--PTTRQRYDGSTTAMEILQGRDFTGKVVLVTGAN 133

  Fly   131 CGIGYETARSLAHHGCEIIFACRNRSSAEAAIERIAQERPAARSRCRFAALDLSSLRSVQRFVEE 195
            .|||:|||:|.|.||..:|.||||.|.|..|:.||.:|...|:...  ..|||:.|||||.|.|.
  Rat   134 SGIGFETAKSFALHGAHVILACRNMSRASEAVSRILEEWHKAKVEA--MTLDLAVLRSVQHFAEA 196

  Fly   196 IKQSVSHIDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFYLTLQLETLF--DYKTRIIVLSSE 258
            .|.....:..|:.|||.||||::.|.|||||||||:||.||||...|:.:.  ....|:||:|||
  Rat   197 FKAKNVPLHILVCNAGTFALPWSLTKDGLETTFQVNHLGHFYLVQLLQDVLCRSAPARVIVVSSE 261

  Fly   259 SHRFANLPVEN--LAVHHLSPPPEKYWSMMAYNNAKLCNVLFAQELAQRWKQRGISVFSLHPGNM 321
            ||||.::...:  |.:..||.....||:|:|||.:||||:||:.||.:....||::..:||||||
  Rat   262 SHRFTDINDSSGKLDLSRLSLSSSDYWAMLAYNRSKLCNILFSNELHRLLSPRGVTSNALHPGNM 326

  Fly   322 VSSDLSRNYWFYRLLFAIVRPFTKSLQQAAATSIYCATANELTGLSGLYFNNCFFCEPSKLSKSA 386
            :.|.:.||.|.|:|||.:.||||||:||.|||::|||.|.||.||.|:|||||..|.||:.:::.
  Rat   327 MFSAIHRNSWVYKLLFTLARPFTKSMQQGAATTVYCAVAPELEGLGGMYFNNCCRCLPSEEAQNE 391

  Fly   387 ALQQQLWKLSENLIAE 402
            ...:.||:|||.||.:
  Rat   392 ETARALWELSERLIQD 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WwoxNP_001285735.1 WW 13..43 CDD:197736 17/29 (59%)
WW 54..86 CDD:197736 15/33 (45%)
PRK06196 104..402 CDD:235736 148/301 (49%)
human_WWOX_like_SDR_c-like 121..402 CDD:187669 142/284 (50%)
WwoxXP_006255728.1 WW 18..47 CDD:395320 16/28 (57%)
WW 60..90 CDD:238122 13/31 (42%)
human_WWOX_like_SDR_c-like 124..407 CDD:187669 142/286 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H56334
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1413827at2759
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.820

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