DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wwox and dhs-24

DIOPT Version :9

Sequence 1:NP_001285735.1 Gene:Wwox / 34090 FlyBaseID:FBgn0031972 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_507860.3 Gene:dhs-24 / 180306 WormBaseID:WBGene00000987 Length:384 Species:Caenorhabditis elegans


Alignment Length:299 Identity:86/299 - (28%)
Similarity:137/299 - (45%) Gaps:24/299 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 LHGKDLHGRTALITGANCGIGYETARSLAHHGCEIIFACRNRSSAEAAIERIAQERPAARSRCRF 178
            || :||.|:|.::|||..|||..||..||.....:|.|||||.........|.......:..|| 
 Worm    42 LH-EDLAGKTYIVTGATSGIGQATAEELAKRNARVIMACRNREKCVQVRRDIVLNTRNKQVYCR- 104

  Fly   179 AALDLSSLRSVQRFVEEI---KQSVSHIDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFYLT- 239
             ..||....|::.||:::   |..:..||.::.||.:.........||:|.|...:||..|.|| 
 Worm   105 -QCDLEDFDSIRTFVQKLSKGKFELDRIDGIVHNAAMMQSERAVNKDGIEKTIATNHLGSFLLTG 168

  Fly   240 LQLETLF--DYKTRIIVLSSE-SHRFANLPVENLAVHHLSPPPEKYWSMMAYNNAKLCNVLFAQE 301
            |.|:.|.  ....||:.|:|. ..|..:|   |||..:.....:|:.....|.::||.:.||.:|
 Worm   169 LLLDKLLAQPNPVRIVFLNSNIIDRKCDL---NLADFNSENAGKKFDGYEIYKHSKLASALFTKE 230

  Fly   302 LAQRWKQRGISVFSLHPGNMVSSDLS-----RNYWFYRLLFAIVRPF---TKSLQQAAATSIYCA 358
            |::|.....|.|....||. ..|:||     :.::..|.|..|| .|   .:..::|....::..
 Worm   231 LSERLSDTNIHVLMADPGR-TKSNLSAQMDGQTFFLSRWLLKIV-SFGMGERRTEKAVRPVLFAL 293

  Fly   359 TANELTGLSGLYFNNCFFCEP-SKLSKSAALQQQLWKLS 396
            ...:.:..:||:.:.....:| :.:...||.:::||.:|
 Worm   294 CDPDTSDENGLFIDRERHQQPWNDVIMDAAKREKLWNVS 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WwoxNP_001285735.1 WW 13..43 CDD:197736
WW 54..86 CDD:197736
PRK06196 104..402 CDD:235736 86/299 (29%)
human_WWOX_like_SDR_c-like 121..402 CDD:187669 82/292 (28%)
dhs-24NP_507860.3 FabG 45..306 CDD:223959 78/267 (29%)
retinol-DH_like_SDR_c_like 48..329 CDD:212492 79/287 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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