DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wwox and dhs-17

DIOPT Version :10

Sequence 1:NP_609171.1 Gene:Wwox / 34090 FlyBaseID:FBgn0031972 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001041109.1 Gene:dhs-17 / 178990 WormBaseID:WBGene00000980 Length:286 Species:Caenorhabditis elegans


Alignment Length:307 Identity:84/307 - (27%)
Similarity:131/307 - (42%) Gaps:56/307 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 RTALITGANCGIGYETARSLAHHGCE-IIFACRNRSSAEAAIERIAQERPAARSRCRFAALDLSS 185
            ||.|||||..|||.:||..||.|... :|...|......|..:.|.:|.... |...:.|.|.:.
 Worm     8 RTILITGATDGIGKQTALDLAAHPDNFVIIHGRTEEKCIATKDWIGKENGNC-SNIDYVAGDFAV 71

  Fly   186 LRSVQRFVEEIKQSVSHIDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFYL-TLQLETLFDYK 249
            |:.|....||:::....::.|:.||||.......|.||:|:||||::|:|:.| .|.|..|...:
 Worm    72 LKEVAIIAEEVERRFPELNVLLCNAGVLYPRRLETKDGMESTFQVNYLAHYLLCNLLLPVLSHNR 136

  Fly   250 TRIIVLSSESHRFANLPVENLAVHHLSPPPEKYWSMMAYNNAKLCNVLFAQELAQRW----KQRG 310
            :.:||:.|..|.:.:|...::..      .::|...:.|:.:||...|.|..|.:|.    :...
 Worm   137 SNVIVVGSVLHTWPSLDWADVMA------TKEYEKYLQYSRSKLMCHLMAFALHRRMNIARQHVN 195

  Fly   311 ISVFSL----HPGNMVSSDLSRNYWFYRLLFAIVRPFTKSLQQAAATSIYCATANELTGL----- 366
            :::..|    .|.|  :..|..               |.:|..:.:|...|..|..|..|     
 Worm   196 VNIIELGKEKEPNN--NGKLRT---------------TSALSSSMSTLSICRQAGNLAQLIEGPC 243

  Fly   367 ----SGLYFNNCFFCEPS-KLSKSAA------LQQQLWKLSENLIAE 402
                ||.|.      :|| |..:|.:      ||::||..|:.|..|
 Worm   244 LEKISGKYL------DPSGKQMRSGSDATDERLQERLWAYSKELCHE 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WwoxNP_609171.1 WW 13..43 CDD:197736
human_WWOX_like_SDR_c-like 121..402 CDD:187669 83/305 (27%)
dhs-17NP_001041109.1 retinol-DH_like_SDR_c_like 7..275 CDD:212492 79/296 (27%)
Blue background indicates that the domain is not in the aligned region.

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