DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7227 and scarb2b

DIOPT Version :9

Sequence 1:NP_001245934.1 Gene:CG7227 / 34088 FlyBaseID:FBgn0031970 Length:518 Species:Drosophila melanogaster
Sequence 2:XP_009299911.1 Gene:scarb2b / 564077 ZFINID:ZDB-GENE-170406-1 Length:523 Species:Danio rerio


Alignment Length:519 Identity:136/519 - (26%)
Similarity:232/519 - (44%) Gaps:44/519 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLLASFSLFSVLYMEQIERWMLEWFMVLRPGTMISSLWQSPAMDINVDLYIFNWTNSEKFSDPTV 79
            ||||..:||:....:.:....|:..:.|..|:.:.:.|::|...:.::.:.||.||.|.|.....
Zfish    18 LLLAGIALFASGLFQTLIHNKLKKEITLTEGSKVFATWKNPPPPVYMEFFFFNVTNPEAFLKGEA 82

  Fly    80 KPRFEELGPYRFTERMQKVNVEWHDENSTVSYRRRSRFDFDPKLSVGRPT-DPIVAPNLLIVGLY 143
            |.|..|:|||.:.|...|.||.:.|..:.|:......|.|.|:.|||.|: |.:...|:..|.:.
Zfish    83 KARLSEMGPYTYREYRPKHNVSFVDNGTKVAAYTPKVFVFVPEKSVGDPSVDMVTTVNIPAVAVM 147

  Fly   144 QKMVMWSPMLRSLMLLALNIYGKEQAMIRPASDWMFDGFDTPMIKMSKMVPPSLVPEMKFPYEKI 208
            .::.....::.|.|.|.:...|.|..|.....:.:: ||..|::...:    |:.||..   |..
Zfish   148 NRIKGAGFLVSSAMSLYMKSIGAEMFMTHTVDELLW-GFKDPLLTKLR----SIKPETD---EFF 204

  Fly   209 GYAYPRNGSMEIYGHHNVYTGRDEFQKLGQIARWRYNNVT---EASPRCKLKGSAGE-FHPIPLV 269
            |....:|||.:  |....:||...:...|:|..|:...:.   :.:....:.|:.|. |||. |.
Zfish   205 GLMLHKNGSDD--GEFVYHTGEHNYLDYGRIFTWKGEKLMSFWKTNQSNMINGTDGSAFHPF-LT 266

  Fly   270 KGRPISYFLPDLCRELQVDYSGTTIFEGIDAFVYRGSARNMANGTDNPDNSCYCQDNCQEVRSGL 334
            |...:..|..||||.:.:.:......:||.|:.:......:|:||:||:|..:|....:.:..|:
Zfish   267 KEERLDVFTADLCRSIHMRFEKEVEVKGIPAYRFTPPRAVLASGTNNPENEGFCLTPKKCLDDGV 331

  Fly   335 LNISSCWYGTPVFASYPHFFKADPYYGEQVEGMKPDKDRHEMVIMLEPKTGMVLEIKARIMANLL 399
            |::|.|..|.||..|:|||...|..|.:.|||:.|..::|:..:.|.|..|:.:....|...|:.
Zfish   332 LDVSVCRQGAPVVVSFPHFHLGDEKYVQAVEGLSPVHEQHQTFLDLNPTMGVPVRAMKRAQINIH 396

  Fly   400 VEPKTHL-IYRTARRTFFPLIWADYNVRITD-------DLLVYVKLMP----ILEFVGKICGILG 452
            :|..|.. :.|....|.||:|:.:.:|.|.:       .||:.|.|:.    ||..:|.|..|:.
Zfish   397 LERVTGFPMTRNLESTIFPIIFLNESVVIDNASAERIQKLLLVVTLVSHFPLILVALGVILLIVA 461

  Fly   453 VVLGLLMVFWYPHQMIWQKSLMHKIEISSIETNSSLE---PVKNNDVEDSPLLKGLQYAAAKDG 513
            |:|.   |.:|          .:|.|:...:...:..   |....|...:|:...:.....|:|
Zfish   462 VILA---VRYY----------QNKTEVKRFDFAEAFHCTAPSAKKDTSYAPVSAKVDDQDEKNG 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7227NP_001245934.1 CD36 13..463 CDD:279474 128/464 (28%)
scarb2bXP_009299911.1 CD36 30..463 CDD:279474 119/443 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.030

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