DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7227 and Snmp2

DIOPT Version :9

Sequence 1:NP_001245934.1 Gene:CG7227 / 34088 FlyBaseID:FBgn0031970 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_001163372.1 Gene:Snmp2 / 38868 FlyBaseID:FBgn0035815 Length:556 Species:Drosophila melanogaster


Alignment Length:556 Identity:127/556 - (22%)
Similarity:227/556 - (40%) Gaps:114/556 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 WQ--TSVLGLLLASFSLFS--VLYMEQIERWMLEWFMVLRPGTMISSLWQSPAMDINVDLYIFNW 68
            |.  .|.||:.:|....:.  :|:...:.: .:|..:|::.|:.....:.:....:|..:||||.
  Fly     4 WSLIVSALGVCVAVLGGYCGWILFPNMVHK-KVEQSVVIQDGSEQFKRFVNLPQPLNFKVYIFNV 67

  Fly    69 TNSEKFSDPTVKPRFEELGPYRFTERMQKVNVEWHDENSTVSYRRRSRFDFDPKLSVG-RPTDPI 132
            |||::.....: |..||:|||.:.:..||....:..:.|.:||.:...||||...|.. ...|.|
  Fly    68 TNSDRIQQGAI-PIVEEIGPYVYKQFRQKKVKHFSRDGSKISYVQNVHFDFDAVASAPYTQDDRI 131

  Fly   133 VAPNL-----------LIVGLYQ-------KMVMWSPMLRSLMLLALNIYGKEQAMIR------- 172
            ||.|:           .|..::|       ..:..:|.:|.|..|...|.||.:::::       
  Fly   132 VALNMHMNAFLQVFEREITDIFQGFANRLNSRLNQTPGVRVLKRLMERIRGKRKSVLQISENDPG 196

  Fly   173 ------------------PAS--------DWMFDGFD---TP---------MIKM--SKMVPPSL 197
                              |.|        :::|||..   .|         .||.  ||.:....
  Fly   197 LALLLVHLNANLKAVFNDPRSMFVSTSVREYLFDGVRFCINPQGIAKAICNQIKESGSKTIREKS 261

  Fly   198 VPEMKFPYEKIGYAYPRNGSMEIYGH--HNVYTGRD------EFQKLG---QIARW-RYNNVTEA 250
            ...:.|.:  .|:   :|||    ||  :.|:||:.      |.|||.   .:..| ..::..|.
  Fly   262 DGSLAFSF--FGH---KNGS----GHEVYEVHTGKGDPMRVLEIQKLDDSHNLQVWLNASSEGET 317

  Fly   251 SPRCKLKGSAGEFHPIPLVKGRPISYFLPDLCRELQVDYSGTTIFEGIDAFVYRGSARNMAN--G 313
            |...::.|:....:|....:|..:..|..|:||.:|:.|.....::||..:.| ....|..|  |
  Fly   318 SVCNQINGTDASAYPPFRQRGDSMYIFSADICRSVQLFYQTDIQYQGIPGYRY-SIGENFINDIG 381

  Fly   314 TDNPDNSCYCQDNCQEV--------RSGLLNISSCWYGTPVFASYPHFFKADPYYGEQVEGMKPD 370
            .:: ||.|:|.|....|        .:|.|::::| ...||..:.||...|...|.:.:.|:|||
  Fly   382 PEH-DNECFCVDKLANVIKRKNGCLYAGALDLTTC-LDAPVILTLPHMLGASNEYRKMIRGLKPD 444

  Fly   371 KDRHEMVIMLEPKTGMVLEIKARIMANLLVEPKTHL-IYRTARRTFFPLIWADYNVRITDDLLVY 434
            ..:|:..:.::..||..|:...|:..|:.::....: |.........|.||.:..:::..:::.:
  Fly   445 AKKHQTFVDVQSLTGTPLQGGKRVQFNMFLKSINRIGITENLPTVLMPAIWVEEGIQLNGEMVAF 509

  Fly   435 VK-----LMPILEFV--GKICGILGVVLGLLMVFWY 463
            .|     .:..|..|  ..:||.:||.:..|:.:.|
  Fly   510 FKKKLINTLKTLNIVHWATLCGGIGVAVACLIYYIY 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7227NP_001245934.1 CD36 13..463 CDD:279474 124/547 (23%)
Snmp2NP_001163372.1 CD36 10..543 CDD:395898 124/546 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450750
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
65.850

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