DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7227 and scarb2c

DIOPT Version :9

Sequence 1:NP_001245934.1 Gene:CG7227 / 34088 FlyBaseID:FBgn0031970 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_001352071.1 Gene:scarb2c / 337532 ZFINID:ZDB-GENE-030131-5789 Length:478 Species:Danio rerio


Alignment Length:474 Identity:124/474 - (26%)
Similarity:210/474 - (44%) Gaps:66/474 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLLASFSLFSVLYMEQIERWMLEWFMVLRPGTMISSLWQSPAMDINVDLYIFNWTN-SEKFSDPT 78
            ||:...:|.....::::....::..:||..||...|:||:|...:.:..|.||.|| :|..|.. 
Zfish    18 LLICGIALELTRVLQKLVNNTVKQQIVLENGTEAFSVWQNPPPPVYMQFYFFNLTNPAEVMSGD- 81

  Fly    79 VKPRFEELGPYRFTERMQKVNVEWHDENSTVSYRRRSRFDFDPKLSVGRPTDPIVAPNLLIVGLY 143
             ||...::|||.:.|......|::.|..:.|:......:.|:|.:|.|...|.:...|:..|.:.
Zfish    82 -KPSVVQIGPYTYREYRPMEEVKFMDNGTRVAAINPKTYVFEPNMSRGSQDDLVRTVNIPAVTVM 145

  Fly   144 QKMVMWSPMLRSLMLLALNIYGKEQAMIRPASDWM-------FD---------GFDTPMIKMSKM 192
            :|.                   |:..:.|..||.|       |:         |::.|::|...|
Zfish   146 EKY-------------------KDSILARLISDLMKAKGVGVFETFRVGDLLWGYEDPLLKELHM 191

  Fly   193 VPPSLVPEMKFPYEKIGYAYPRNGSMEIYGHHNVYTGRDEFQKLGQIARWRYNNVTE--ASPRCK 255
                |||:..|     |..|.:||:.  |..:.:.||:.::|....|..|.......  :|..|.
Zfish   192 ----LVPDDHF-----GLFYKKNGTE--YDSYVLLTGKPDYQDFASIDEWNGQRSLNWWSSEECN 245

  Fly   256 -LKGSAG-EFHPIPLVKGRPISYFLPDLCRELQVDYSGTTIFEGIDAFVYRGSARNMANGTDNPD 318
             :.|:.| .|||| :.|...:..|..||||.|.|.|......:|:..|.:...|...::...|||
Zfish   246 MINGTDGASFHPI-ITKADRLYIFSSDLCRSLYVQYECDVSVQGVPGFRFVPPADVFSSPDINPD 309

  Fly   319 NSCYCQDNCQEVRSGLLNISSCWYGTPVFASYPHFFKADPYYGEQVEGMKPDKDRHEMVIMLEPK 383
            |:.:|......:.|||||.|.|..|.|:..|.|||::||..:.:.:.||||.|:.|:....:.|.
Zfish   310 NAGFCVPPGHCLGSGLLNASVCKQGAPIIMSSPHFYQADQKFVDDIWGMKPIKEEHQTFADINPL 374

  Fly   384 TGMVLEIKARIMANLLVEPKTHLIYRTARRTF-FPLIWADYNVRITDDLL-----------VYVK 436
            ||:||:...|:..|:.::..:........:|. ||:::.:.:..|.::..           |.:.
Zfish   375 TGIVLQGAKRVQVNVYLQQHSSFSQTGKIQTLVFPVMYINESAFIDEESAKKLHAVVLNANVVIN 439

  Fly   437 LMPILEFVGKICGILGVVL 455
            :..|:..||.:.||:.:||
Zfish   440 IPFIVISVGILLGIIFIVL 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7227NP_001245934.1 CD36 13..463 CDD:279474 124/474 (26%)
scarb2cNP_001352071.1 CD36 15..457 CDD:307331 122/471 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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