DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7227 and Scarb1

DIOPT Version :9

Sequence 1:NP_001245934.1 Gene:CG7227 / 34088 FlyBaseID:FBgn0031970 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_001192012.1 Gene:Scarb1 / 20778 MGIID:893578 Length:520 Species:Mus musculus


Alignment Length:460 Identity:123/460 - (26%)
Similarity:220/460 - (47%) Gaps:31/460 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LGLLLASFSLFSVLYMEQIERWMLEWFMVLRPGTMISSLWQSPAMDINVDLYIFNWTNSEKFSDP 77
            ||||.|:..:..:|.:..:.:..:...:.:.|.::...:|:...:...:.:|.|...|..:..:.
Mouse    17 LGLLFAALGVVMILMVPSLIKQQVLKNVRIDPSSLSFGMWKEIPVPFYLSVYFFEVVNPNEVLNG 81

  Fly    78 TVKPRFEELGPYRFTERMQKVNVEWHDENSTVSYRRRSRFDFDPKLSVGRPTDPIVAPNLLIVGL 142
            . ||...|.|||.:.|..||||:.::| |.|||:.......|.|..|.|..:|.||.||:|::|.
Mouse    82 Q-KPVVRERGPYVYREFRQKVNITFND-NDTVSFVENRSLHFQPDKSHGSESDYIVLPNILVLGG 144

  Fly   143 YQKMVMWSPMLRSLMLLALNIYGKEQAMIRPASDWMFDGFDTPMIKMSKMVPPSLVPEMKFPYEK 207
            ...|......|:.:|.|||...|:...|.|...:.:: |:|.|.:.......|.::| :|   .|
Mouse   145 SILMESKPVSLKLMMTLALVTMGQRAFMNRTVGEILW-GYDDPFVHFLNTYLPDMLP-IK---GK 204

  Fly   208 IGYAYPRNGSMEIYGHHNVYTGRDEFQKLGQIARWRYNNVTEA----SPRCK-LKGSAGEFHPIP 267
            .|.....|.|..  |...|:||...|.::..:.:|  |.:::.    |.:|. :.|::|:.....
Mouse   205 FGLFVGMNNSNS--GVFTVFTGVQNFSRIHLVDKW--NGLSKIDYWHSEQCNMINGTSGQMWAPF 265

  Fly   268 LVKGRPISYFLPDLCRELQVDYSGTTIFEGIDAFVYRGSARNMANGTDNPDNSCYCQDNCQEVRS 332
            :.....:.:|.|:.||.:::.|:.:.:||||..:.:.......|||:..|.|..:|.  |:|  |
Mouse   266 MTPESSLEFFSPEACRSMKLTYNESRVFEGIPTYRFTAPDTLFANGSVYPPNEGFCP--CRE--S 326

  Fly   333 GLLNISSCWYGTPVFASYPHFFKADPYYGEQVEGMKPDKDRHEMVIMLEPKTGMVLEIKARIMAN 397
            |:.|:|:|.:|.|:|.|:|||:.|||...|.|.|:.|:...|.:.:.:.|.||:.:....::..:
Mouse   327 GIQNVSTCRFGAPLFLSHPHFYNADPVLSEAVLGLNPNPKEHSLFLDIHPVTGIPMNCSVKMQLS 391

  Fly   398 LLVEPKTHLIYRTAR--RTFFPLIWADYNVRI----TDDLLVYVKLMP-ILEFVGKICGILGVVL 455
            |.:: ....|.:|.:  ....||:|.:.:..:    .......:.||| :|.:...:...||   
Mouse   392 LYIK-SVKGIGQTGKIEPVVLPLLWFEQSGAMGGKPLSTFYTQLVLMPQVLHYAQYVLLGLG--- 452

  Fly   456 GLLMV 460
            |||::
Mouse   453 GLLLL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7227NP_001245934.1 CD36 13..463 CDD:279474 123/460 (27%)
Scarb1NP_001192012.1 CD36 26..447 CDD:279474 113/436 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838303
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.860

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