DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7227 and Scarb2

DIOPT Version :9

Sequence 1:NP_001245934.1 Gene:CG7227 / 34088 FlyBaseID:FBgn0031970 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_031670.1 Gene:Scarb2 / 12492 MGIID:1196458 Length:478 Species:Mus musculus


Alignment Length:468 Identity:130/468 - (27%)
Similarity:219/468 - (46%) Gaps:39/468 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TSVLGLLLASFSLFSVLYMEQIERWMLEWFMVLRPGTMISSLWQSPAMDINVDLYIFNWTNSEKF 74
            |..|.||:.|.:|......::.....:|..|||:.||.:.:.|:.|.:.:.:..|.||.||.|:.
Mouse    11 TLSLLLLVTSVTLLVARVFQKAVDQTIEKNMVLQNGTKVFNSWEKPPLPVYIQFYFFNVTNPEEI 75

  Fly    75 SDPTVKPRFEELGPYRFTERMQKVNVEWHDENSTVSYRRRSRFDFDPKLSVGRPTDPIV----AP 135
            ....: |..||:|||.:.|...|.|:::.:..:|:|......:.|:...|||.|...::    .|
Mouse    76 LQGEI-PLLEEVGPYTYRELRNKANIQFGENGTTISAVTNKAYVFERNQSVGDPNVDLIRTINIP 139

  Fly   136 NLLIVGLYQKMVMWSPMLRSLMLLALNIYGKEQAMIRPASDWMFDGFDTPMIKMSKMVPPSLVPE 200
            .|.:|.|.|     ..:||.|:...|..|.::..:|....:.:: |:...::.:..:..|.:.| 
Mouse   140 LLTVVDLAQ-----LTLLRELIEAMLKAYQQKLFVIHTVHELLW-GYKDEILSLVHIFKPDVSP- 197

  Fly   201 MKFPYEKIGYAYPRNGSMEIYGHHNVYTGRDEFQKLGQIARWRYNNVTE----ASPRCK-LKGSA 260
                  ..|..|.|||:.:  |.:...||.|.:....:|..|  |..|.    .:..|. :.|:.
Mouse   198 ------NFGLFYERNGTND--GEYVFLTGEDNYLNFSKIVEW--NGKTSLDWWTTDTCNMINGTD 252

  Fly   261 GE-FHPIPLVKGRPISYFLP-DLCRELQVDYSGTTIFEGIDAFVYRGSARNMANGTDNPDNSCYC 323
            |: ||  ||:....:.|..| ||||.:.:.:|.....||:.||.|:..|..:||.::|. ..|..
Mouse   253 GDSFH--PLISKDEVLYLFPSDLCRSVHITFSSFENVEGLPAFRYKVPAEILANTSENA-GFCIP 314

  Fly   324 QDNCQEVRSGLLNISSCWYGTPVFASYPHFFKADPYYGEQVEGMKPDKDRHEMVIMLEPKTGMVL 388
            :.||.:  ||:||||.|..|.|:..|:|||::||..:...::||.|:|:.||..:.:.|.||::|
Mouse   315 EGNCMD--SGVLNISICKNGAPIIMSFPHFYQADEKFVSAIKGMHPNKEEHESFVDINPLTGIIL 377

  Fly   389 EIKARIMANLLVEPKTHLIYRTARRTF-FPLIWADYNVRI----TDDLLVYVKLMPILEFVGKIC 448
            ....|...|..|......:.....||. ||:::.:.:|.|    .:.|...:....::..:..|.
Mouse   378 RGAKRFQINTYVRKLDDFVETGDIRTMVFPVMYLNESVLIDKETANQLKSVINTTLVVTNIPYII 442

  Fly   449 GILGVVLGLLMVF 461
            ..|||..||:..:
Mouse   443 MALGVFFGLVFTW 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7227NP_001245934.1 CD36 13..463 CDD:279474 129/465 (28%)
Scarb2NP_031670.1 CD36 28..455 CDD:279474 124/449 (28%)
Important for interaction with GBA 155..191 5/36 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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