DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7227 and scarb1

DIOPT Version :9

Sequence 1:NP_001245934.1 Gene:CG7227 / 34088 FlyBaseID:FBgn0031970 Length:518 Species:Drosophila melanogaster
Sequence 2:XP_002935333.1 Gene:scarb1 / 100490714 XenbaseID:XB-GENE-494666 Length:505 Species:Xenopus tropicalis


Alignment Length:513 Identity:131/513 - (25%)
Similarity:233/513 - (45%) Gaps:95/513 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IGKQRIWQTSVLGLLLASFS-----LFSVLYMEQIERWMLEWFMVLRPGTMIS-SLWQSPAMDIN 60
            :|.::.....|||:||....     |..|:..||:|:     .:.:.|.:..: .:|:...:...
 Frog     4 VGNKKSIVFGVLGVLLVGVGTLLVFLVPVIMDEQVEK-----NVRIDPSSGFAYEMWRDLPVPFY 63

  Fly    61 VDLYIFNWTNSEK--FSDPTVKPRFEELGPYRFTERMQKVNVEWHDENSTVSYRRRSRFDFDPKL 123
            :.:|||...|.::  ..:   ||:.:|.|||.:.|..:|.|:.: :||.|||:.....|.|||:.
 Frog    64 MSIYIFEVVNHKEVLLGE---KPQLQERGPYVYREYKKKQNITF-NENGTVSFVEFRTFHFDPEK 124

  Fly   124 SVGRPTDPIVAPNLLIVGLYQKMVMWSPMLRSLMLL-------ALNIYGKEQAMIRPASDWMFDG 181
            |.|:..|.::.||:|::|.       |.||:.|.:.       |.:.:.:|..:.:...|.:: |
 Frog   125 SNGKEEDHVIVPNILVLGS-------SVMLQDLGIAIKWIISGAFSAFNEEAFINKTVKDILW-G 181

  Fly   182 FDTPMIKMSKMVPPSLVPEMKFPYE-KIGYAYPRNGSMEIYGHHNVYTGRDEFQKLGQIARWR-- 243
            ::.|.:.......|.     |.|:: |.|:....|.|..  |...|.||.::..::..:..|.  
 Frog   182 YEDPFLDFLNTFLPG-----KLPFKGKFGFFSDFNNSNT--GVFTVNTGMEDISRVQMVDNWNGL 239

  Fly   244 ----YNNVTEASPRCKLKGSAGEFHPIPLVK-GRPISYFLPDLCRELQVDYSGTTIFEGIDAFVY 303
                :.|..:.:   .:.|:||:..| |..| ..|:.::.||.||.:::.|.....|.||..|.|
 Frog   240 KKVDFWNSEQTN---MINGTAGQMWP-PFRKPSEPLEFYSPDACRSMKLVYEKEEKFRGIPTFRY 300

  Fly   304 RGSARNMANGTDNPDNSCYCQDNCQEVRSGLLNISSCWYGTPVFASYPHFFKADPYYGEQVEGMK 368
            .......|||:|.|.|..:|.  |  |.||:.|:|:|.:..|:|.|:|||:.|||.:.|.|||:.
 Frog   301 TAPNYLFANGSDYPPNEGFCP--C--VASGVQNVSACRFNAPLFLSFPHFYNADPGFLESVEGLH 361

  Fly   369 PDKDRHEMVIMLEPKTGMVLEIKARIMANLLVEPKTHLIYR-TARRTFFPLIW------------ 420
            |.::.|.:.:.:.|.||:.:....::..|:|.:..:.::.. ..:....|::|            
 Frog   362 PTEELHSLFLDMHPLTGIPMNCSIKMQLNMLTKSVSGIMQTGQIKPVILPVLWFAESGHLDGPVY 426

  Fly   421 -ADYNVRITDDLLVYVKLMPI-LEFVGKICGILGVVL--------------GLLMVFW 462
             ..||:.|         |||| ||::..:  ::|:.|              |...:||
 Frog   427 NTYYNILI---------LMPIVLEYLQYV--LIGIGLCFITVALVLPFVKQGKCFLFW 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7227NP_001245934.1 CD36 13..463 CDD:279474 129/502 (26%)
scarb1XP_002935333.1 CD36 28..461 CDD:366481 122/475 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

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