DRSC/TRiP Functional Genomics Resources

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Protein Alignment pes and SCARB2

DIOPT Version :9

Sequence 1:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_005497.1 Gene:SCARB2 / 950 HGNCID:1665 Length:478 Species:Homo sapiens


Alignment Length:475 Identity:133/475 - (28%)
Similarity:235/475 - (49%) Gaps:48/475 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LGICC-----------IASGIYL-----FRNWIDMFTRMRGQEMALSPNSRSFEGWKVSPLPLDF 64
            :|.||           :.:.:.|     |:..:|....   :::.|...:.:|:.|:..|||:..
Human     1 MGRCCFYTAGTLSLLLLVTSVTLLVARVFQKAVDQSIE---KKIVLRNGTEAFDSWEKPPLPVYT 62

  Fly    65 DIYLFNWTNPDDFYVGSNKKPHFEQLGPYRFREKPDKVDIEWHNHNASVSFHKKSWFYFDAAGSN 129
            ..|.||.|||::...|  :.|..|::|||.:||..:|.:|::.::..::|......:.|:...|.
Human    63 QFYFFNVTNPEEILRG--ETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQSV 125

  Fly   130 GS-LWDKVTTVNSVAHSAARRAAVDW----FARTGVNIANKLYRQGVTITKTVDEMLFKGYEHPF 189
            |. ..|.:.|:|...     ...::|    |.|..:....|.|:|.:.:|.||||:|: ||:...
Human   126 GDPKIDLIRTLNIPV-----LTVIEWSQVHFLREIIEAMLKAYQQKLFVTHTVDELLW-GYKDEI 184

  Fly   190 ISVGKLLRPQDVPYKRIGYHYPRNGSSEFDGDINMFTGADDIAKMGQIHTWNNLTHTGAF-EGTC 253
            :|:..:.||...||  .|..|.:||::  |||....||.|......:|..||..|....: ...|
Human   185 LSLIHVFRPDISPY--FGLFYEKNGTN--DGDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDKC 245

  Fly   254 GQVHGSMGEFFPPNLGTKDTV-YMYMPKMCRAIPLDYVETVTVHGVTAYKFSGTRHAVDNGTLYP 317
            ..::|:.|:.|.| |.|||.| |::....||::.:.:.:..:|.|:.|:::......:.|.:   
Human   246 NMINGTDGDSFHP-LITKDEVLYVFPSDFCRSVYITFSDYESVQGLPAFRYKVPAEILANTS--- 306

  Fly   318 DTRCYCV-GGKCMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGLRPEREKHEFFMALEP 381
            |...:|: .|.|:.|||:|:..|...|.:.|||||||.||..::.||||:.|.:|.||.|:.:.|
Human   307 DNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQEDHETFVDINP 371

  Fly   382 NAGVPMDVGGGFQANYYMEPIPGITLYENVPTVMIPMMWCEERVRVSEEIAADI-ALVPLIVLLG 445
            ..|:.:.....||.|.|::.:.......::.|::.|:|:..|.|.:.:|.|:.: :::...:::.
Human   372 LTGIILKAAKRFQINIYVKKLDDFVETGDIRTMVFPVMYLNESVHIDKETASRLKSMINTTLIIT 436

  Fly   446 QIVTGILLAG---GLICTCW 462
            .|...|:..|   ||:.| |
Human   437 NIPYIIMALGVFFGLVFT-W 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_001137808.1 CD36 14..463 CDD:279474 133/475 (28%)
SCARB2NP_005497.1 CD36 28..455 CDD:307331 128/446 (29%)
Important for interaction with GBA 155..191 12/36 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5605
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.880

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