DRSC/TRiP Functional Genomics Resources

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Protein Alignment pes and SCARB1

DIOPT Version :10

Sequence 1:NP_609168.2 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001354910.1 Gene:SCARB1 / 949 HGNCID:1664 Length:552 Species:Homo sapiens


Alignment Length:560 Identity:147/560 - (26%)
Similarity:246/560 - (43%) Gaps:101/560 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LGIVLLGICCIASGIYLFRNWIDMFTRMRGQEMALSPNSRSFEGWKVSPLPLDFDIYLFNWTNPD 75
            ||:.  |:.|...|..:......:..:...:.:.:.|:|.||..||..|:|....:|.|:..||.
Human    14 LGVA--GLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIPIPFYLSVYFFDVMNPS 76

  Fly    76 DFYVGSNKKPHFEQLGPYRFREKPDKVDIEWHNHNASVSFHKKSWFYFDAAGSNGSLWDKVTTVN 140
            :...|  :||...:.|||.:||...|.:|.: |:|.:|||.:...|.|..:.|:||..|.:...|
Human    77 EILKG--EKPQVRERGPYVYREFRHKSNITF-NNNDTVSFLEYRTFQFQPSKSHGSESDYIVMPN 138

  Fly   141 SVAHSAARRAAVDWFARTGVNIANKLYRQGVTIT-------------KTVDEMLFKGYEHPFISV 192
            .:...||            |.:.||.....:.:|             :||.|::: ||:.|.:::
Human   139 ILVLGAA------------VMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIMW-GYKDPLVNL 190

  Fly   193 GKLLRPQDVPYK-RIGYHYPRNGSSEFDGDINMFTGADDIAKMGQIHTWNNLTHTGAFEG-TCGQ 255
            .....|...|:| :.|.....|.|.  .|...:|||..:|:::..:..||.|:....:.. .|..
Human   191 INKYFPGMFPFKDKFGLFAELNNSD--SGLFTVFTGVQNISRIHLVDKWNGLSKVDFWHSDQCNM 253

  Fly   256 VHGSMGEFFPPNLGTKDTVYMYMPKMCRAIPLDYVETVTVHGVTAYKFSGTRHAVDNGTLYPDTR 320
            ::|:.|:.:||.:..:.::..|.|:.||::.|.|.|:....|:..|:|...:....||::||...
Human   254 INGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYRFVAPKTLFANGSIYPPNE 318

  Fly   321 CYCVGGKCMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGLRPEREKHEFFMALEPNAGV 385
            .:|   .|:.||:.|:..|.|:|.:::|.|||..|||...||:.||.|.:|.|..|:.:.|..|:
Human   319 GFC---PCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTGLHPNQEAHSLFLDIHPVTGI 380

  Fly   386 PMDVGGGFQANYYMEPIPGITLYENVPTVMIPMMWCEERVRVSEE----IAADIALVPLIVLLGQ 446
            ||:.....|.:.||:.:.||.....:..|::|::|..|...:..|    ....:.|:|.::...|
Human   381 PMNCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESGAMEGETLHTFYTQLVLMPKVMHYAQ 445

  Fly   447 IVTGILLAGG-------LIC--------------------TCW---------YPTRQVTHFCHSD 475
            .|   |||.|       :||                    .||         :||.     ..|.
Human   446 YV---LLALGCVLLLVPVICQIRSQVGAGQRAARADSHSLACWGKGASDRTLWPTA-----AWSP 502

  Fly   476 PKAKASVLRPL-----NAFGVNSS--------AATAPVAQ 502
            |  .|:|||..     :.:|:.|:        |.|.||.:
Human   503 P--PAAVLRLCRSGSGHCWGLRSTLASFACRVATTLPVLE 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_609168.2 CD36 15..463 CDD:460076 131/502 (26%)
SCARB1NP_001354910.1 CD36 16..446 CDD:460076 121/452 (27%)

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