DRSC/TRiP Functional Genomics Resources

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Protein Alignment pes and Snmp1

DIOPT Version :9

Sequence 1:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001262803.1 Gene:Snmp1 / 42514 FlyBaseID:FBgn0260004 Length:551 Species:Drosophila melanogaster


Alignment Length:472 Identity:114/472 - (24%)
Similarity:212/472 - (44%) Gaps:51/472 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VLLGICCIASGIYLFR---NWIDMFTR----MRGQEMALSPNSRSFEGWKVSPLPLDFDIYLFNW 71
            :|:|    :..:::|.   .|: :|.:    |..:::.|.|.|...|.|..:|.||.|.||:||.
  Fly     8 LLMG----SGAMFVFAIIYGWV-IFPKILKFMISKQVTLKPGSDVRELWSNTPFPLHFYIYVFNV 67

  Fly    72 TNPDDFYVGSNKKPHFEQLGPYRFREKPDKVDIEWHNHNASVSFHKKSWFYFDAAGS---NGS-- 131
            ||||:  |....||..:::||:.|.|..||.|:|......:|||..::.|.|:...|   .|.  
  Fly    68 TNPDE--VSEGAKPRLQEVGPFVFDEWKDKYDLEDDVVEDTVSFTMRNTFIFNPKESLPLTGEEE 130

  Fly   132 --LWDKVTTVNSVAHSAARRAAVDWFARTGVNIA------------NKLYRQGVTITKTVDEMLF 182
              |...:.....::....:.|.::..:: |::|.            ..|:.:|:.:..:.:|...
  Fly   131 IILPHPIMLPGGISVQREKAAMMELVSK-GLSIVFPDAKAFLKAKFMDLFFRGINVDCSSEEFSA 194

  Fly   183 KGYEHPFISVGKLLRPQDVPYKRIGYHYPRNGSSEFDGDINMFTGADDIAKMGQIHTWNNLTHTG 247
            |.....|.: |::.:.:.|......:.:....:....|...:..|..:..|:|::..:.:.....
  Fly   195 KALCTVFYT-GEIKQAKQVNQTHFLFSFMGQANHSDSGRFTVCRGVKNNKKLGKVVKFADEPEQD 258

  Fly   248 AF-EGTCGQVHGSMGEFFPPNLGTKDTVYMYMPKMCRAIPLDYVETVTVHGVTAYKFSGTRHAVD 311
            .: :|.|....|:....|.|.|..:|.::.:.|.:||::...|....:.||:.:     .|:.:|
  Fly   259 IWPDGECNTFVGTDSTVFAPGLKKEDGLWAFTPDLCRSLGAYYQHKSSYHGMPS-----MRYTLD 318

  Fly   312 NGTLYPDTR--CYCVGGK----CMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGLRPER 370
            .|.:..|.:  |:|...:    |.|.|.:|:..| ....:..|.||||:.||..:..::||.|..
  Fly   319 LGDIRADEKLHCFCEDPEDLDTCPPKGTMNLAAC-VGGPLMASMPHFYLGDPKLVADVDGLNPNE 382

  Fly   371 EKHEFFMALEPNAGVPMDVGGGFQANYYMEPIPGITLYENVPTVMIPMMWCEERVRVSEEIAADI 435
            :.|..::..|..:|.|.......|.|..|||:.||...:|:|.:::||.|.||.|::::...   
  Fly   383 KDHAVYIDFELMSGTPFQAAKRLQFNLDMEPVEGIEPMKNLPKLILPMFWVEEGVQLNKTYT--- 444

  Fly   436 ALVPLIVLLGQIVTGIL 452
            .||...:.||..:..:|
  Fly   445 NLVKYTLFLGLKINSVL 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_001137808.1 CD36 14..463 CDD:279474 114/472 (24%)
Snmp1NP_001262803.1 CD36 12..478 CDD:279474 112/464 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450729
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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