DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pes and Snmp2

DIOPT Version :9

Sequence 1:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001163372.1 Gene:Snmp2 / 38868 FlyBaseID:FBgn0035815 Length:556 Species:Drosophila melanogaster


Alignment Length:554 Identity:134/554 - (24%)
Similarity:225/554 - (40%) Gaps:127/554 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LGICCIASGIYLFRNWI---DMFTRMRGQEMALSPNSRSFEGWKVSPLPLDFDIYLFNWTNPDDF 77
            ||:|....|.|.  .||   :|..:...|.:.:...|..|:.:...|.||:|.:|:||.||.|..
  Fly    11 LGVCVAVLGGYC--GWILFPNMVHKKVEQSVVIQDGSEQFKRFVNLPQPLNFKVYIFNVTNSDRI 73

  Fly    78 YVGSNKKPHFEQLGPY---RFREKPDKVDIEWHNHNASVSFHKKSWFYFDA-AGSNGSLWDKVTT 138
            ..|:  .|..|::|||   :||:|..|   .:....:.:|:.:...|.||| |.:..:..|::..
  Fly    74 QQGA--IPIVEEIGPYVYKQFRQKKVK---HFSRDGSKISYVQNVHFDFDAVASAPYTQDDRIVA 133

  Fly   139 VNSVAHSAA-----RRAAVDWF------------ARTGVNIANKLYR------------------ 168
            :|  .|..|     .|...|.|            ...||.:..:|..                  
  Fly   134 LN--MHMNAFLQVFEREITDIFQGFANRLNSRLNQTPGVRVLKRLMERIRGKRKSVLQISENDPG 196

  Fly   169 -------------------QGVTITKTVDEMLFKGYEHPFISVGKLLRPQDVPYKRIGYHYPRNG 214
                               :.:.::.:|.|.||.|       |...:.||.:. |.|......:|
  Fly   197 LALLLVHLNANLKAVFNDPRSMFVSTSVREYLFDG-------VRFCINPQGIA-KAICNQIKESG 253

  Fly   215 S----SEFDGDI----------------NMFTGADD------IAKMGQIH---TWNNLTHTGAFE 250
            |    .:.||.:                .:.||..|      |.|:...|   .|.|.:..|. .
  Fly   254 SKTIREKSDGSLAFSFFGHKNGSGHEVYEVHTGKGDPMRVLEIQKLDDSHNLQVWLNASSEGE-T 317

  Fly   251 GTCGQVHGSMGEFFPPNLGTKDTVYMYMPKMCRAIPLDYVETVTVHGVTAYKFS-GTRHAVDNGT 314
            ..|.|::|:....:||.....|::|::...:||::.|.|...:...|:..|::| |.....|.|.
  Fly   318 SVCNQINGTDASAYPPFRQRGDSMYIFSADICRSVQLFYQTDIQYQGIPGYRYSIGENFINDIGP 382

  Fly   315 LYPDTRCYCVG---------GKCMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGLRPER 370
            .: |..|:||.         ..|:.:|.:::..| .:|.|.::.||...|...|.:.|.||:|:.
  Fly   383 EH-DNECFCVDKLANVIKRKNGCLYAGALDLTTC-LDAPVILTLPHMLGASNEYRKMIRGLKPDA 445

  Fly   371 EKHEFFMALEPNAGVPMDVGGGFQANYYMEPIPGITLYENVPTVMIPMMWCEERVRVSEEIAADI 435
            :||:.|:.::...|.|:..|...|.|.:::.|..|.:.||:|||::|.:|.||.::::.|:.|..
  Fly   446 KKHQTFVDVQSLTGTPLQGGKRVQFNMFLKSINRIGITENLPTVLMPAIWVEEGIQLNGEMVAFF 510

  Fly   436 --ALVPLIVLLGQIVTGILLAGGL----ICTCWY 463
              .|:..:..| .||....|.||:    .|..:|
  Fly   511 KKKLINTLKTL-NIVHWATLCGGIGVAVACLIYY 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_001137808.1 CD36 14..463 CDD:279474 133/552 (24%)
Snmp2NP_001163372.1 CD36 10..543 CDD:395898 133/552 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450740
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
65.850

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