DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pes and Cd36

DIOPT Version :9

Sequence 1:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_113749.2 Gene:Cd36 / 29184 RGDID:2301 Length:472 Species:Rattus norvegicus


Alignment Length:478 Identity:124/478 - (25%)
Similarity:224/478 - (46%) Gaps:38/478 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RHCARL-GIVLLGICCIASGIYLFRNWIDMFTRMRGQEMALSPNSRSFEGWKVSPLPLDFDIYLF 69
            |:|..: |.|:..:..:..||.:....: :..:...:|:.|...:.:|:.|..:...:....::|
  Rat     5 RNCGLITGAVIGAVLAVFGGILMPVGDL-LIEKTIKREVVLEEGTIAFKNWVKTGTTVYRQFWIF 68

  Fly    70 NWTNPDDFYVGSNKKPHFEQLGPYRFREK-PDKVDIEWHNHNASVSFHKKSWFYFDAAGSNGSLW 133
            :..||::....|: |...:|.|||.:|.: ..|.:|.....:::|||.:.:...|:.:.|.|:..
  Rat    69 DVQNPEEVAKNSS-KIKVKQRGPYTYRVRYLAKENITQDPKDSTVSFVQPNGAIFEPSLSVGTEN 132

  Fly   134 DKVTTVNSVAHSAARRAAVDWFARTGVNIANKLYRQGVTITKTVDEMLFKGYEHPFISVGKLLRP 198
            |..|.:| :|.:||.....:.|.:..:|...|..:..:..|:::.|:|: ||:.||:|:      
  Rat   133 DNFTVLN-LAVAAAPHIYTNSFVQGVLNSLIKKSKSSMFQTRSLKELLW-GYKDPFLSL------ 189

  Fly   199 QDVPY---KRIGYHYPRNGSSEFDGDINMFTGADDIAKMGQIHTWNNLTHTGAFEGTCGQVHGSM 260
              |||   ..:|..||.|.:  .||...:|.|.|:|:|:..|.|:....:...:|..|..::|:.
  Rat   190 --VPYPISTTVGVFYPYNNT--VDGVYKVFNGKDNISKVAIIDTYKGKRNLSYWESYCDMINGTD 250

  Fly   261 GEFFPPNLGTKDTVYMYMPKMCRAIPLDYVETVTVHGVTAYKFSGTRHAVDNGTLYPDTRCYC-- 323
            ...|||.:....|:..:...:||:|...:...|.:.|:..|:|....:|..:....||..|:|  
  Rat   251 AASFPPFVEKSRTLRFFSSDICRSIYAVFGSEVNLKGIPVYRFVLPANAFASPLQNPDNHCFCTE 315

  Fly   324 --VGGKCMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGLRPEREKHEFFMALEPNAGVP 386
              :...|...||::||.|.....||:|.|||..|.|...|.||||.|..::|..::.:||..|..
  Rat   316 KVISNNCTSYGVLDIGKCKEGKPVYISLPHFLHASPDVSEPIEGLNPNEDEHRTYLDVEPITGFT 380

  Fly   387 MDVGGGFQANYYMEPIPGITLYENVP-TVMIPMMWCEERVRVSEE--------IAADIALVPLI- 441
            :......|.|..::|...|...:|:. ..::|::|..|...:.:|        :...|.|:.|: 
  Rat   381 LQFAKRLQVNILVKPARKIEALKNLKRPYIVPILWLNETGTIGDEKAEMFRNQVTGKIKLLGLVE 445

  Fly   442 -VLLGQIVTGILLAGGLI--CTC 461
             ||||  |..::....:|  |.|
  Rat   446 MVLLG--VGVVMFVAFMISYCAC 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_001137808.1 CD36 14..463 CDD:279474 121/469 (26%)
Cd36NP_113749.2 CD36 14..463 CDD:395898 119/464 (26%)
Required for interaction with thrombospondins, THBS1 and THBS2. /evidence=ECO:0000250 93..120 6/26 (23%)
Interaction with PTK2, PXN and LYN. /evidence=ECO:0000250|UniProtKB:P16671 460..472 3/7 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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