DRSC/TRiP Functional Genomics Resources

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Protein Alignment pes and scarb2a

DIOPT Version :10

Sequence 1:NP_609168.2 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_775366.1 Gene:scarb2a / 192340 ZFINID:ZDB-GENE-020419-29 Length:531 Species:Danio rerio


Alignment Length:456 Identity:129/456 - (28%)
Similarity:226/456 - (49%) Gaps:19/456 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CARLGIVLLGICCIASGIYLFRNWIDMFTRMRGQEMALSPNSRSFEGWKVSPLPLDFDIYLFNWT 72
            ||.|  ::|||..:.:.::.     .|......:|:.|:.|||..:||...|.|:....:.||.|
Zfish    15 CAHL--LILGIALLLAQVFQ-----TMIQERIKKEITLAENSRVLDGWINPPPPVYMQYFFFNVT 72

  Fly    73 NPDDFYVGSNKKPHFEQLGPYRFREKPDKVDIEWHNHNASV-SFHKKSWFYFDAAGSNGSLWDKV 136
            |||:|..| .:|....|:|||.:||...:.::.:..:...: :.:.||:.:.....:.....|:|
Zfish    73 NPDEFLAG-KEKAKVTQMGPYTYREYRPRENVTYLENGTKIFATNPKSFVFLRNMSAGDPEVDRV 136

  Fly   137 TTVNSVAHSAARRA-AVDWFARTGVNIANKLYRQGVTITKTVDEMLFKGYEHPFISVGKLLRPQ- 199
            ||||....:..... :..:|.||.|::.......|:.:.:||.|:|: |::.|.::....:||: 
Zfish   137 TTVNIPMIAVMNELNSYSFFVRTAVSMYMGSMGMGLFMNRTVHEILW-GFKDPLLTKLHAMRPEV 200

  Fly   200 DVPYKRIGYHYPRNGSSEFDGDINMFTGADDIAKMGQIHTWNNLTHTGAFEGT-CGQVHGSMGEF 263
            |   :..|..|.:||:.|  |:....||..:....|:|.|||.::....:... ...::|:.|..
Zfish   201 D---EHFGLMYNKNGTHE--GEFVFHTGEKNYMNYGKIDTWNGISQMNWWSSNQSNMINGTDGSV 260

  Fly   264 FPPNLGTKDTVYMYMPKMCRAIPLDYVETVTVHGVTAYKFSGTRHAVDNGTLYPDTRCYCV-GGK 327
            |...|..|:.:|::...:||:|.|.||..:.|.|:.|::|:.....:......|....:|| .|.
Zfish   261 FHTFLSRKELLYIFAADLCRSIHLGYVRDMEVKGIPAFRFAPPSDVLAPPDENPANAGFCVPAGD 325

  Fly   328 CMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGLRPEREKHEFFMALEPNAGVPMDVGGG 392
            |:..||:.:..|...|.:.:||||||.||..|:.||||:.|..|:||.::.:.|..|||:.....
Zfish   326 CLGKGVLKVSVCRQGAPIVVSFPHFYQADERYINAIEGMNPNEEEHETYLDINPTTGVPIRACKR 390

  Fly   393 FQANYYMEPIPGITLYENVPTVMIPMMWCEERVRVSEEIAADIALVPLIVLLGQIVTGILLAGGL 457
            .|.|..::.:.|....:.:...:.|:|:..|...:.:|.||.:.::.|||.:......|:||.|:
Zfish   391 AQLNIILKRVRGFPNTKFLNETIFPIMYVNETATIDDESAAQMRMLLLIVTVVSNFPVIILALGV 455

  Fly   458 I 458
            |
Zfish   456 I 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_609168.2 CD36 15..463 CDD:460076 126/449 (28%)
scarb2aNP_775366.1 CD36 30..465 CDD:460076 123/439 (28%)

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