DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pes and scav-6

DIOPT Version :9

Sequence 1:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_492081.1 Gene:scav-6 / 184107 WormBaseID:WBGene00008542 Length:590 Species:Caenorhabditis elegans


Alignment Length:603 Identity:127/603 - (21%)
Similarity:227/603 - (37%) Gaps:124/603 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IVLLGICCIASGIYLFRNWIDMFTRMRGQEMALSPNSRSFEGWK----VSPLPLD--FDIYLFNW 71
            :|::.|..|..||..:..:..:::.:..:.:.|:.||.:..|:.    .|| .:|  ...|.||.
 Worm    14 LVVIAIVFIVFGIVTWAAFSSIYSTLVIKNLQLTENSDTSLGYSAFQYTSP-QVDNIMKFYFFNV 77

  Fly    72 TNPDD--FYVGSNKKPHFEQLGPYRFREKPDKVDIEWHNHNASVSFHK-KSWFYFDAAGSNGSLW 133
            ||||:  :|   :..|:..::||:...|...|..:|:.:..:.:.:.. |.:............|
 Worm    78 TNPDEVKYY---SAAPNLVEIGPFSVMESEQKKYLEFSDDKSQMFYQNYKKYILSKDYSCEDCDW 139

  Fly   134 DKVTT------VNSVAHSAARRAAVDWFARTGVNIANKLYRQGVTITKTVDEMLFKGYEHPFISV 192
            |:...      :.:||.....:..:....||.:.:|..:..:...::..|.|:||.|||...:|.
 Worm   140 DRNIVFPNPPGLGAVASMLDPQFQITKTGRTIIAVALTILGEYPFVSHKVREVLFDGYEDALLSA 204

  Fly   193 ----------------GKLLRPQDVP-YKRIGYHYPRNGSSEFDGDINMFTGADDIAKMGQIHTW 240
                            |..:.|..:| ..:.||....|.|.  |.:..:.||..||.::|.:..|
 Worm   205 AHSGFVTVLSGIFKGDGGSIVPIPIPAMPKFGYFQGYNNSR--DEEYWIETGKKDINQIGNVQRW 267

  Fly   241 NNLTH-TGAFEGT--CGQVHGS-MGEFFPPNLGTKDTVYMYMPKMCRAIPLDYVETVTVHGV--- 298
            ..:|. .|.:..|  ...:.|| .|.|...:|....|..|:...|||:....:.:..|:..:   
 Worm   268 AGITELPGEWWTTPKARSIRGSDSGSFTQMHLDESSTADMFFSFMCRSFTKTFYQRETIESIPTI 332

  Fly   299 -----------TAYKFSGTRHA-VDNGTLYPDTRCYCVGGKCMPSGVINIGPCS----------- 340
                       |:....|.|:. ::....:||.......|:|..||.|:   ||           
 Worm   333 GYHIGYDEWDTTSDNNVGFRYRNIEKRNYFPDWPKCPPKGQCHQSGSID---CSKSINFCHACCD 394

  Fly   341 ---FNA-----------------------SVYMSFPHFYMADPSYLEAIEGLRPEREKHE-FFMA 378
               :|.                       :|..|.|||..:.......:.|:.|.:..|| ....
 Worm   395 GSLYNGTYLLPPGMFPLVCYPGRLQPTPFAVVYSPPHFLFSPDEVRTTVVGMAPNKSLHEPMIYY 459

  Fly   379 LEPNAGVPMDVGGGFQANYYMEPIPGITLYENVPTVMIPMMWCEERVR----VSEEIAADIALVP 439
            .||.:|..:.|....|.|..:.....:...:|:|.||||:.|.:...:    :..|:.....|||
 Worm   460 HEPYSGTTLKVVNRLQVNMPVIRSHDVPSSQNMPNVMIPLFWQDTSPKYHQFIFNEVWLGFVLVP 524

  Fly   440 LIVLLGQIVT---GILLAGGLICTCWYPTRQVTHFCHSDPKAKASVLRPLNAFGVNSSAATAPVA 501
            .::.:.|.|.   |:||...::   :...|          |.|.|::|||....:.::      :
 Worm   525 RLMRVLQFVALGIGLLLVAIIV---FLQLR----------KGKPSLIRPLKTSFLETT------S 570

  Fly   502 QLFRNNISSSGNERVGVR 519
            ....:..||:.||..|:|
 Worm   571 NWLSSTSSSNSNESRGLR 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_001137808.1 CD36 14..463 CDD:279474 114/544 (21%)
scav-6NP_492081.1 CD36 18..547 CDD:279474 113/540 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5605
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.880

Return to query results.
Submit another query.