DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pes and scav-4

DIOPT Version :9

Sequence 1:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_510157.2 Gene:scav-4 / 181429 WormBaseID:WBGene00008692 Length:560 Species:Caenorhabditis elegans


Alignment Length:579 Identity:142/579 - (24%)
Similarity:216/579 - (37%) Gaps:154/579 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LGIVLLGICCIASGIYLFRNWIDMFTRMRGQEMALSPNSRSFEGWKVSPLPLDFDIYLFNWTNPD 75
            |||.||    |...|.:|::.:|....::.:.....|....:  |...|....:..:|||.||||
 Worm    19 LGIFLL----IPFPIAIFQSIVDSQVYLQQKSDGQLPTGTFY--WSKIPAVQIWTFHLFNVTNPD 77

  Fly    76 D-FYVGSNKKPHFEQLGPYRFREKPDKVDIEWHNHNASVSF-HKKSWFYFDAAGS--NGSLWDKV 136
            : .|.|:.  |:..::|||.:.|...|...::.:::..:.: :.|:|.| |...|  :..|.|.|
 Worm    78 EVLYYGAT--PNMLEIGPYTYTETEFKDFTQFRDNDNEIFYVNNKTWVY-DPTRSCEDCKLSDSV 139

  Fly   137 TTVNSVAHSAARRAAVDWFART----------GVNIANKLYRQGVTITKTVDEMLFKGYEHPFIS 191
            ...|:...|..       |.:.          |:::...|..:....|.|....||.||..|.|:
 Worm   140 QFANTAYMSTV-------FMQIYQPAGPIVGFGLDVLTILLGEQPLRTVTAGGTLFDGYNDPLIT 197

  Fly   192 -------------VGKLLRPQDVPYKRIGYHYPRNGSSEFDGDINMFTGADDIAKMGQIHTWNNL 243
                         :|..::...||......||    |...||:..:.||.|:...:|||.|||.|
 Worm   198 LINSPLVKVLLSVLGNPVQLPQVPAAGFFPHY----SHTCDGNYTIRTGKDNTDYVGQIKTWNGL 258

  Fly   244 TH--------TGAFEGTCGQVHGSMGEFFPPNLGTKDTVYMYMPKMCRAIPLDYVETVTVHGVTA 300
            ||        |....|||.      |....|.:...|||..:...:||...|.|.|:.||:.:..
 Worm   259 THLPWWKTEDTSDLRGTCD------GTIQKPGIQKTDTVVQFQSFLCRKYNLHYHESKTVNSIPT 317

  Fly   301 YKFS------------GTRHA-VDNGTLYPDTRC----------------------YC------- 323
            |.|.            |.|:. .:....:|:..|                      :|       
 Worm   318 YGFKVEDDSYDAIKNPGYRYENFEKVNYFPNWPCGLNHTKQNNGNCALVDCNQYDNFCNACCDGS 382

  Fly   324 -VGG-----------KCMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGLRPEREKHE-- 374
             |.|           :|:|..::   |..|.|  .:|.||||.|.....|::.|:.|:.|.|.  
 Worm   383 HVNGTYVMPPGMVPQRCLPGQMV---PTPFGA--ILSAPHFYGAPKVVTESMVGIHPDPELHRPG 442

  Fly   375 -FFMALEPNAGVPMDVGGGFQANYYMEPIP-----GITLYENVPTVMIPMMWCEERVRVSEEIAA 433
             |::    |......:||.|:   .|..||     ..||..|.|..::|.......| |.::.|.
 Worm   443 TFYI----NPATGSTIGGEFR---MMLSIPVFQSLAWTLMSNAPNAIMPSFTLTIGV-VMKDYAV 499

  Fly   434 -----DIALVPLIVL-LGQIVTGILLAGGLICTCWYPTRQVTHFCH--SDPKAKASVLR 484
                 :...:|.||| ||...|.:.|...|:   |       .||:  |...||..||:
 Worm   500 NYIYFNTVTIPNIVLGLGIGFTAVSLIAVLL---W-------GFCYFRSKRNAKPFVLQ 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_001137808.1 CD36 14..463 CDD:279474 131/551 (24%)
scav-4NP_510157.2 CD36 11..533 CDD:279474 135/562 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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