DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pes and scav-5

DIOPT Version :9

Sequence 1:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_509651.2 Gene:scav-5 / 181200 WormBaseID:WBGene00011076 Length:536 Species:Caenorhabditis elegans


Alignment Length:454 Identity:108/454 - (23%)
Similarity:179/454 - (39%) Gaps:99/454 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LFNWTNPDDF-YVGSNKKPHFEQLGPYRFREKPDKVDIEWHNHNASVSFHK-KSWFYFDA---AG 127
            |||.||||:. |:|:  ||...::|.|.|.|...|...|:.:....:.:.. |.:.|.:.   ||
 Worm    71 LFNVTNPDEVKYLGA--KPELIEVGGYAFLESEQKKYYEFSSDKTKMFYQNYKQYHYSEVDNDAG 133

  Fly   128 SNGSLWDKVTTVNSVAHSAAR-----RAAVDWFARTGVNIANKLYRQGVTITKTVDEMLFKGYEH 187
            .|.:  ||:...||:|..|..     ::.....|:..|:|...:..:...|:|||.::|..|||.
 Worm   134 YNYN--DKIMFPNSIAEGAVSTVFGPQSEFSPTAKILVSIGLVMLGEYPFISKTVKDVLMDGYED 196

  Fly   188 PFISV---------------GKLLR--PQDVPYKRIGYHYPRNGSSEFDGDINMFTGADDIAKMG 235
            |.:||               |..|.  |:   .|...|....|.|  :|.:..:.||.:|..|:|
 Worm   197 PLLSVAHSGIFISLVNFYGYGSQLNYIPE---MKTFAYLSGYNNS--YDENYWINTGYNDFNKLG 256

  Fly   236 QIHTWNNLTH--------------TGAFEGTCGQVHGSMGEFFPPNLGTKDTVYMYMPKMCRAIP 286
            .:.:|..|..              .|...|:..::|          |...|.:..::..|||:..
 Worm   257 FVESWAGLEQLPASFWPTLEARQIKGPDSGSLSKIH----------LTKTDELPFFLSFMCRSFK 311

  Fly   287 LDYVETVTVHGV--------------TAYKFSGTRHA-VDNGTLYPD----------TRCY--CV 324
            ..|.:...|.|:              |..|.:|.|:. .:|...:||          ::|.  ..
 Worm   312 RTYWQDGLVDGIKTMAFAVPYEEFDTTLEKNAGFRYKNQENVDYFPDWCDKNTTTSLSQCQKTAN 376

  Fly   325 GGKCMPSGVINIGPC--SFNA----SVYMSFPHFYMADPSYLEAIEGLRPEREKHE-FFMALEPN 382
            |...:|.|:..: .|  ..||    :|.:|.|||..:.|.....:.|:.|:.|||: .....|..
 Worm   377 GTFLLPPGIFPL-VCYPGHNAQPPFTVLVSPPHFLYSPPEVQHHLSGMNPDPEKHKPMVFHQEKT 440

  Fly   383 AGVPMDVGGGFQANYYMEPIPGITLYENVPTVMIPMMWCEERVRVS----EEIAADIALVPLIV 442
            :|..:.|...||.|..:....|..:...:|.|:||:.:.:....|.    :.:...:.:||.|:
 Worm   441 SGTALQVDVRFQVNLPVVNNKGSIMSSQMPNVIIPLFYEDSHALVKDFVMDTVWLGVIIVPRII 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_001137808.1 CD36 14..463 CDD:279474 108/454 (24%)
scav-5NP_509651.2 CD36 15..524 CDD:279474 108/454 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

Return to query results.
Submit another query.