DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pes and scav-1

DIOPT Version :9

Sequence 1:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_508919.2 Gene:scav-1 / 180812 WormBaseID:WBGene00015389 Length:563 Species:Caenorhabditis elegans


Alignment Length:588 Identity:122/588 - (20%)
Similarity:214/588 - (36%) Gaps:132/588 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTSRTRHC-ARLGIV-LLGICCIASGIYLFRN-WIDMFTRMRGQEMALSPNS----RSF-EGWKV 57
            |.||:..| ...||: |:|...:.:|:.:..| :.::..........|..|:    .|| :.|..
 Worm     1 MASRSCICQVSAGIIFLIGAALLVAGLVIVLNVFPNIVNNQINDSKVLGLNADGTLNSFTDSWVN 65

  Fly    58 SPLPLDFDIYLFNWTNPDDFYVGSNKK---PHFEQLGPYRFREKPDKVDIEWHNHNASVSFHKKS 119
            |........:::::||.    :|...:   |...:.|||.|.|......:.:..:...:.|.:..
 Worm    66 SKYISTMQYWVYDYTNT----IGIMNRAIYPDVREKGPYAFDEILTMDKLNFSENGEFMEFRQIQ 126

  Fly   120 WFYFD----AAGSN---------------GSLWDKVTTV----------NSVAHS--AARRAAVD 153
            .|.|:    .||.:               |.  |::.||          .::.|:  ..:..|..
 Worm   127 TFVFNPNKSCAGCDPYKDKVLIPDMGFQVGI--DQIDTVIEGILKNPLAATICHAIMKGKPNANQ 189

  Fly   154 WFARTGVNIANKLYRQGVTI---------TKTVDEMLFKGYEHPFIS-------------VGKLL 196
            ..:..|..|..:|   |..|         |.|||::||.||:.||:.             .|...
 Worm   190 TCSNLGALIEGEL---GTLISLFNVSPFTTVTVDQLLFSGYKTPFVEKFLDEALGMLHFLFGTAP 251

  Fly   197 RPQDVPYKRIGYHYPRNGSSEFDGDIN-MFTGADDIAKMGQIHTWNNLTHTGAFEGT-------- 252
            :|.|.|..::.   |.||:|:.   || :.||..|..|.|.:..:.::::...|...        
 Worm   252 KPLDDPPIQLN---PLNGTSDI---INTVLTGKTDPLKAGYMTEFRSISNNSLFNSIGNTLPPMW 310

  Fly   253 --------CGQ------VHGSMGEFFPPNLGTKDTVYMYMPKMCRAIPLDYVETVTVHGVTAYKF 303
                    |..      :.|:.|::|...:...|.:..::..:||.|...:...|||.|...|:|
 Worm   311 WPYANKTYCKDPNSALVLTGTNGDYFKNFVKKTDILPAFVSDVCRTIHFVFDREVTVKGFKGYRF 375

  Fly   304 SGTRHAVDNGTLYPDTRC-YCVGGK-----------CMPSGVINIGPCSFNASVYMSFPHFYMAD 356
            .......|...   |..| ||:..|           |:|||:::|..|: ...:.||.||||.|.
 Worm   376 VMPPTQFDYSL---DENCGYCIPLKYGSYEYPAQSACLPSGLLDISQCT-GGPIIMSKPHFYQAS 436

  Fly   357 PSYLEAIEGLRPEREKHEFFMALEPNAGVPMDVGGGFQANYYMEPIPGITLYENVPTVMIPMMWC 421
            ....:.:...:|..:..|..:.:|||.|..:......|.|..:.....|..|..:.....|:.|.
 Worm   437 KVVSKFVPRFKPTYDNDETMLDIEPNTGTVLQAQKRLQINMLVNQFKHIRSYSVMRPGAYPLAWV 501

  Fly   422 EERV--------RVSEEIAADIALVPLIVLLGQIVTGILLAGGLICTCWYPTRQVTHFCHSDPKA 478
            .|..        :::.::...::.|..|..:...:...|:|..::...      |:..|..|...
 Worm   502 NESFYMDQNTIDQLNSQLFTPVSTVNTICWIAVGLGAGLIALSIVMVI------VSFCCFRDEHH 560

  Fly   479 KAS 481
            |.|
 Worm   561 KTS 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_001137808.1 CD36 14..463 CDD:279474 111/554 (20%)
scav-1NP_508919.2 CD36 19..546 CDD:279474 110/545 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4750
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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