DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pes and scav-2

DIOPT Version :9

Sequence 1:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_499802.3 Gene:scav-2 / 176787 WormBaseID:WBGene00013578 Length:558 Species:Caenorhabditis elegans


Alignment Length:516 Identity:114/516 - (22%)
Similarity:207/516 - (40%) Gaps:107/516 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RTRHCARLGI--VLLGICCIASGIYLFRNWIDMFTRM--RGQEMALSPNSR------SFEGWKVS 58
            |...|.:|.|  ||:|:     |.:|....:...|.:  :..:.::..|||      .:|.|.:.
 Worm    27 RRMSCCQLVISAVLIGL-----GSFLLFGSLITHTVVVPKVVKSSIEENSRLVNGSIMWEKWAMP 86

  Fly    59 PLPLDFDIYLFNWTNPDDFYVGSNKKPHFEQLGPYRFREKPDK--VDIEWHNHNASVSFHKKSWF 121
            ...:.|::|:::..|||:|..|:  .|.....|||.|.:|.:.  |..|    |.:|.:.:...:
 Worm    87 EYKIRFNMYVYSTKNPDEFMNGA--IPEVTGSGPYVFDKKMENRVVSAE----NGTVKYRRFFTY 145

  Fly   122 YFDAAGSNGS--LWDKVTTVNSVAHSAARRAAVDWFARTGVNIANKLYRQGVTITKTVDEMLFKG 184
            .|:...|..:  |.:::...|.:.......|:.:.....    |..|..|...:...|:|:||:|
 Worm   146 NFNEQESCQTCILGNRIWVPNMIYQKFVEAASTEGMKAA----ATTLLSQTAFLEVEVEELLFEG 206

  Fly   185 YEHPFISVGKLLRPQDVPY------------KRIGYHYPRNGSSE-----FDGDINMFTGADDIA 232
            |:.||:.     :..::|:            :|||..:..||:..     .||..|    .||:.
 Worm   207 YKDPFLD-----KVCEIPFMNFVCEAILDVPERIGLFFKANGTGSKVYEIDDGTRN----PDDLG 262

  Fly   233 KMGQI-------HTWNNLTHTGAFEGTCGQVHGSMGEFFPPNLGTKDTVYMYMPKMCRAIPLDYV 290
            |:...       .||.:...:...:||.|.:       |.|.|...:.:|:|:.::||:|.|::.
 Worm   263 KILSYDESPILDETWWSTDESLKIKGTDGSL-------FHPFLSKHEKLYVYVAELCRSIWLEFK 320

  Fly   291 ETVTVHGVTAYKFSGTRHAVDNGTLYPDTRCYC------------VGGKCMPSGVINIGPC-SFN 342
            |.|...|:.||:|.......|  ..:|..:.:|            ....|||.|::.|..| ...
 Worm   321 EEVEYRGLKAYRFVVPPEVFD--VTHPGNQGFCNPSEKQFYESQNDSSNCMPKGLLEISKCQQSQ 383

  Fly   343 ASVYMSFPHFYMADPSYLEAIEGLRPERE-KHEFFMALEPNAGVPMDVGGGFQANYYMEPIPGIT 406
            ..:.:|.|:|..|......:::||....| :....:.:||..|..:......|.|..|.....:|
 Worm   384 PPITISLPNFLFAPSEVRGSVKGLNETDEIRDSIVVDIEPRVGAVLYARRVSQVNIEMWKGKNLT 448

  Fly   407 LYEN---VPTVMIPMMWCEERVRV--------------SEEIA---ADIALV--PLIVLLG 445
            ...|   :.:.:||::...|...:              :|.||   .|:.::  .:::|||
 Worm   449 FPVNLKKMKSALIPVLILHETSEIDDDSLEQIRSQLYETESIAYTSCDVMMIIGAIMLLLG 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_001137808.1 CD36 14..463 CDD:279474 110/504 (22%)
scav-2NP_499802.3 CD36 46..505 CDD:279474 103/486 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5605
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4750
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.880

Return to query results.
Submit another query.