DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pes and Scarb2

DIOPT Version :9

Sequence 1:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_446453.1 Gene:Scarb2 / 117106 RGDID:621882 Length:478 Species:Rattus norvegicus


Alignment Length:437 Identity:126/437 - (28%)
Similarity:220/437 - (50%) Gaps:27/437 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QEMALSPNSRSFEGWKVSPLPLDFDIYLFNWTNPDDFYVGSNKKPHFEQLGPYRFREKPDKVDIE 105
            :.|.|...::.|:.|:..|||:....|.||.|||::...|  :.|..|::|||.:||..:|.:::
  Rat    39 KNMVLQNGTKVFDSWEKPPLPVYIQFYFFNVTNPEEILQG--EIPLLEEVGPYTYRELRNKANVQ 101

  Fly   106 WHNHNASVSFHKKSWFYFDAAGSNGS-LWDKVTTVN----SVAHSAARRAAVDWFARTGVNIANK 165
            :..:..::|......:.|:...|.|. ..|.:.|:|    :|...|.:.     |.|..:....|
  Rat   102 FGENGTTISAVTNKAYIFERNQSVGDPTVDLIRTINIPLLTVVEMAQQP-----FLREIIEAMLK 161

  Fly   166 LYRQGVTITKTVDEMLFKGYEHPFISVGKLLRPQDVPYKRIGYHYPRNGSSEFDGDINMFTGADD 230
            .|:|.:.:|.||.|:|: ||:...:|:..:.||...|  ..|..|.|||::  ||:....||.|:
  Rat   162 AYQQTLFVTHTVHELLW-GYKDEVLSLVHIFRPDVSP--NFGLFYERNGTN--DGEYVFLTGEDN 221

  Fly   231 IAKMGQIHTWNNLTHTGAF-EGTCGQVHGSMGEFFPPNLGTKDTVYMYMPKMCRAIPLDYVETVT 294
            .....:|..||..|....: ..||..::|:.|:.|.|.:...:|:|::....||::.:.:.....
  Rat   222 YLNFTKIVEWNGKTSLDWWTTDTCNMINGTDGDSFHPLISKDETLYIFPSDFCRSVYITFSSFEN 286

  Fly   295 VHGVTAYKFSGTRHAVDNGTLYPDTRCYCV-GGKCMPSGVINIGPCSFNASVYMSFPHFYMADPS 358
            |.|:.|:::......:.|.:   :...:|: .|.||.:||:|:..|...|.:.|||||||.||..
  Rat   287 VEGLPAFRYKVPAEILANSS---ENAGFCIPEGNCMDAGVLNVSICKNGAPIIMSFPHFYQADEK 348

  Fly   359 YLEAIEGLRPEREKHEFFMALEPNAGVPMDVGGGFQANYYMEPIPGITLYENVPTVMIPMMWCEE 423
            ::.||:|:||.:|:||.|:.:.|..|:.:.....||.|.|::.:.......|:.|::.|:|:..|
  Rat   349 FVSAIKGMRPNKEEHESFVDINPLTGIILRGAKRFQINTYVKKLDDFVETGNIRTMVFPVMYLNE 413

  Fly   424 RVRVSEEIAADIALVPLIVLLGQIVTGILLA----GGLICTCWYPTR 466
            .|.:.:|.|:.:..|....|:...:..|::|    .|||.| |...|
  Rat   414 SVLIDKETASQLKSVINTTLIVTNIPYIIMALGVFFGLIFT-WLACR 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_001137808.1 CD36 14..463 CDD:279474 124/432 (29%)
Scarb2NP_446453.1 CD36 34..457 CDD:395898 125/433 (29%)
Important for interaction with GBA. /evidence=ECO:0000250 155..191 11/36 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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