DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pes and cd36l

DIOPT Version :9

Sequence 1:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_002933143.3 Gene:cd36l / 100496002 XenbaseID:XB-GENE-5870091 Length:483 Species:Xenopus tropicalis


Alignment Length:486 Identity:115/486 - (23%)
Similarity:201/486 - (41%) Gaps:81/486 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ARLGIVLLGI------------CCIASGIYLFRNWIDMFTRMRGQEMALSPNSRSFEGWKVSPLP 61
            |.:||||..:            ..|..|...|.||:          :..||..|||         
 Frog    25 AVVGIVLFPVNNILNHEAVTKTSVIEEGTAAFDNWV----------LPRSPVYRSF--------- 70

  Fly    62 LDFDIYLFNWTNPDDFYVGSNKKPHFEQLGPYRF--REKPDKVDIEWHNHNASVSFHKKSWFYFD 124
                 ::::..||:|...|.  ||..:|.|||.:  |..| |:.|..| .|.::|:.:.:...|.
 Frog    71 -----WIYHVRNPNDIINGG--KPELQQKGPYTYLVRRIP-KLGITQH-ENFTMSYLQYNDAIFQ 126

  Fly   125 AAGSNGSLWDKVTTVNSVAHSAARRAAVDWFARTGVNIAN---KLYRQGVTITKTVDEMLFKGYE 186
            ...|.||..|..|.:| ||.::......|:.......|.|   .|::     .:||.|:|: ||.
 Frog   127 RHMSVGSEEDTHTVLN-VAVASTPDMFPDYHEMLNTAITNSSSSLFQ-----VRTVKELLW-GYN 184

  Fly   187 HPFISVGKLLRPQDVPYKRI----GYHYPRNGSSEFDGDINMFTGADDIAKMGQIHTWNNLTHTG 247
            .||:        :.:|:..|    |..||.||:  .||..|::.|.|||:|:..|..:.......
 Frog   185 DPFL--------EQIPFPDIDTTTGVFYPYNGT--LDGPYNVYNGKDDISKVAVIERYKGERSLS 239

  Fly   248 AFEG-TCGQVHGSMGEFFPPNLGTKDTVYMYMPKMCRAIPLDYVETVTVHGVTAYKFSGTRHAVD 311
            .:.| .|..::|:....|.|....|:.::.:.|..||::...:.:...:.|:...:|...:....
 Frog   240 YWNGDNCNMINGTDAFLFSPFNKKKNHLFFFSPDACRSLYGVFEKEYDLKGIKMNRFVVPKEVFA 304

  Fly   312 NGTLYPDTRCYC----VGGKCMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGLRPEREK 372
            :.....|..|:|    |...|...|::.:..|.....:::|.|||.......|:|:.||:|...:
 Frog   305 SSAENSDNHCFCKDMKVTRNCTADGILELRACRDRKPIFLSLPHFLYGSQFLLDAVGGLKPNEYE 369

  Fly   373 HEFFMALEPNAGVPMDVGGGFQANYYMEPIPGITLYENVPT-VMIPMMWCEERVRVSEEIAAD-- 434
            |..::.:||..|..:......|.|...:....|.:...:.: .:.|::|..|...::::.|.|  
 Frog   370 HRSYIDVEPVTGNALHYAKRLQINVMFQQTNKIDVMSKLQSGFVFPVLWLNETSLITDDAAKDFK 434

  Fly   435 -IALVPL----IVLLGQIVTGILLAGGLICT 460
             |.:.|:    ||.:..:..|.::.  |.|:
 Frog   435 AIVINPMRTIEIVAIQFVCVGCIMF--LACS 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_001137808.1 CD36 14..463 CDD:279474 112/481 (23%)
cd36lXP_002933143.3 CD36 19..464 CDD:395898 115/486 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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