DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pes and cd36

DIOPT Version :9

Sequence 1:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001107151.1 Gene:cd36 / 100135002 XenbaseID:XB-GENE-493679 Length:470 Species:Xenopus tropicalis


Alignment Length:476 Identity:123/476 - (25%)
Similarity:218/476 - (45%) Gaps:54/476 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LGIVLLGICCIASGIYLFRNWIDMFTRMRGQEMALSPNSRSFEGWKVSPLPLDFDIYLFNWTNPD 75
            :|.|:.|:..|..|| ||.....:..:....|..:...:.::|.|..:..|:....::::.||||
 Frog    11 VGSVIGGLLAILGGI-LFPVGDMIINKEISTEAVIEEGTIAYENWIEAGSPVYRHFWIYHVTNPD 74

  Fly    76 DFYVGSNKKPHFEQLGPYRFR----EKPDKVDIEWHNHNASVSFHKKSWFYFDAAGSNGSLWDKV 136
            :...|.  ||..:|.|||.:|    .|.:...:|    |.:||:.:.:...|...||.|...|..
 Frog    75 EIINGG--KPILQQKGPYTYRVRYLPKENITQLE----NNTVSYWQPNGAIFQREGSYGPEEDTY 133

  Fly   137 TTVN-SVAHSAARRAAVDWFARTGVNIANKLYRQGVTITKTVDEMLFKGYEHPFISVGKLLRPQD 200
            |.:| :||.:.|...|:.......:..:|....|    .::|.|:|: ||..||:.  |:  |.|
 Frog   134 TVLNLAVAAAPAMFPALQGLLNAIIKSSNSSLFQ----VRSVKELLW-GYRDPFLE--KI--PID 189

  Fly   201 VPYKRIGYHYPRNGSSEFDGDINMFTGADDIAKMGQIHT---------WNNLTHTGAFEGTCGQV 256
            ...|..|..||.||::  ||..:::.|..||:|:..|..         ||        :..|..:
 Frog   190 SIDKTTGLFYPNNGTA--DGIYHVYNGKGDISKVAIIDRYKEAKALPYWN--------DDFCDMI 244

  Fly   257 HGSMGEFFPPNLGTKDTVYMYMPKMCRAIPLDYVETVTVHGVTAYKFSGTRHAVDNGTLYPDTRC 321
            :|:....|||::.....:|.:..::||:|...:.:...|.|:..|:|..|..|:.:.|..||..|
 Frog   245 NGTDAASFPPSVKKDKRLYFFSSEICRSIYGIFEKEYMVKGIKLYRFVVTEDAMASPTKNPDNHC 309

  Fly   322 YC----VGGKCMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGLRPEREKHEFFMALEPN 382
            :|    :...|..:||:::..|.....:::|.|||..|....|:::.||:|.:|:||.::.:||.
 Frog   310 FCKDFQLSRNCTAAGVLDLRSCQGGKPIFLSLPHFLYASDYLLDSVSGLKPNKEEHETYIDVEPI 374

  Fly   383 AGVPMDVGGGFQANYYMEPIPGITLYENVPTVMI-PMMWCEERVRVSEEIA---ADIALVPLIVL 443
            .|..|......|.|..::|...|.:...:.:.:: |:.|..|...:.::.|   ......|:.|:
 Frog   375 TGFTMHFAKRLQVNVMIQPTDKIEVMSKLQSELVFPVAWLNETALIGDDSANMFKSKVTTPMKVV 439

  Fly   444 LGQIVTGILLAGG----LICT 460
              :|:..:||..|    |.|:
 Frog   440 --EILRIVLLCVGSVVFLACS 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pesNP_001137808.1 CD36 14..463 CDD:279474 122/473 (26%)
cd36NP_001107151.1 CD36 16..459 CDD:366481 121/471 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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