DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and SRP2

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:397 Identity:94/397 - (23%)
Similarity:161/397 - (40%) Gaps:90/397 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKKNVATIYDKLLTKLER------GK 88
            |..|.:.||..:...:::.....|..|......:.......:....|:.:|.:.:.:      |.
plant    55 KNSNCVFSPASINAVLTVTAANTDNKTLRSFILSFLKSSSTEETNAIFHELASVVFKDGSETGGP 119

  Fly    89 KVAILHLANRLFVNETIGVNKRYNKLVNKHFRA---------EAEAIKLADRLKAAWAINDWVLD 144
            |:|.:   |.:::.:::..|..:..|....|:|         :||.::|        .:|.|...
plant   120 KIAAV---NGVWMEQSLSCNPDWEDLFLNFFKASFAKVDFRHKAEEVRL--------DVNTWASR 173

  Fly   145 QTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMSQVGR 209
            .|.|.:|:|:....:|...:.:..||.:|||.|:..|||..|:.|.|::.....|:|..|....:
plant   174 HTNDLIKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHLLNGKSVSVPFMRSYEK 238

  Fly   210 FKMRTSTIDQIIELPFAYS------NLSMVIVLPKDNGSLTQAEATIESYPQIVLTEMDVHV--- 265
            ..:......:::.||:...      ..||.:.||...|.|......|.|.|..    :|.|:   
plant   239 QFIEAYDGFKVLRLPYRQGRDDTNREFSMYLYLPDKKGELDNLLERITSNPGF----LDSHIPEY 299

  Fly   266 -------QLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEIDEEG 323
                   ::|||||:|..|         ...:|| ..:::|.|:|          ||.|||||||
plant   300 RVDVGDFRIPKFKIEFGFE---------ASSVFN-DFELNVSLHQ----------KALIEIDEEG 344

  Fly   324 GSAGSASASPIRGLSDYATSVVT------------FTVNSPFVFMIRDD--DNIYFRGRVVDPLK 374
            ..|.:|:          ...|||            |..:.||:|:||:|  ..:.|.|::.||.:
plant   345 TEAAAAT----------TVVVVTGSCLWEPKKKIDFVADHPFLFLIREDKTGTLLFAGQIFDPSE 399

  Fly   375 KSNPIDR 381
            .|:.:||
plant   400 LSSALDR 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 89/383 (23%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 89/386 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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