DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Serpine3

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_006252257.2 Gene:Serpine3 / 691375 RGDID:1585042 Length:413 Species:Rattus norvegicus


Alignment Length:398 Identity:94/398 - (23%)
Similarity:174/398 - (43%) Gaps:58/398 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WILVTTSVLGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNL---- 66
            |:|.|     :|...||:|...:....|.:.||..|.:.:.::...|.|||..:|..||..    
  Rat    29 WLLKT-----EFALHLYQSAAAETNGTNFVISPASVSLSLEILQFAARGNTGWQLAEALGYTVQD 88

  Fly    67 PEDKKNVATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADR 131
            |..::.:.|:|    ..|....:...:.||..||:.....::..:.:.|:   |....:::|||.
  Rat    89 PRVREFLHTVY----ITLHNSSQGIGMELACTLFMQTGTSLSPCFVEQVS---RWANSSLELADF 146

  Fly   132 LKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAV------------MINAAFFKGYWKTRFDKM 184
            .:..        ..|::..|....||......|.:            :::...|:..|:.||..:
  Rat   147 SEPN--------TTTMEASKGTTRPSTGEGPGSPLWGRAGALSTQLSIVSTMTFQSSWQQRFSSV 203

  Fly   185 NTKPKVFYVSKSYQVNVNMMSQV-----GRFKMRTSTIDQIIELPFAYSNLSMVIVLPKDNGS-L 243
            ..:|..|..:....:.|..|.||     |:|:........::||.:.....|:::|||:|.|: |
  Rat   204 ALQPLPFTCAHGLVLQVPAMHQVAEVSYGQFQDAAGHKVDVLELLYLGRVASLLLVLPQDKGTPL 268

  Fly   244 TQAEATIES------YPQIVLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNS-SSDISVLL 301
            ...|..:.:      ..::....|||.  ||:|:|..:.:|...|:|.||.|||:. .:::..:.
  Rat   269 DHIEPHLTARVIHLWTTRLKRARMDVF--LPRFRIQNQFDLKSILRSWGITDLFDPLKANLKGIS 331

  Fly   302 NQSGTRISQVVHKAFIEIDEEGGSAGSASASPIRGLSDYATSVVTFTVNSPFVFMIRDDDNIYFR 366
            .:.|..:|:|.|||.:|:.|||..:.:|:|..:...|    ....|..:.||:|::|:.:.:..|
  Rat   332 GRDGFYVSEVTHKAKMELSEEGTKSCAATAVLLLRRS----RTPAFKADRPFIFLLREHNTVAVR 392

  Fly   367 ---GRVVD 371
               |:|.:
  Rat   393 ITHGKVAN 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 90/384 (23%)
Serpine3XP_006252257.2 serpin 20..400 CDD:422956 94/396 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.110

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