DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Da and Serpinb1a

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_079705.2 Gene:Serpinb1a / 66222 MGIID:1913472 Length:379 Species:Mus musculus


Alignment Length:382 Identity:116/382 - (30%)
Similarity:194/382 - (50%) Gaps:39/382 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKKNVATIYDKLL 81
            |..:|:::..:.:...||..||..:...::|:::||.|:||.:|....:. :..:::.:.:..|.
Mouse    11 FALELFQTLNESSPTGNIFFSPFSISSALAMVILGAKGSTAAQLSKTFHF-DSVEDIHSRFQSLN 74

  Fly    82 TKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAA----WAINDWV 142
            .::.:......|.|||||:..:|......|.....|.:.|:...:   |.|.|:    ..||.||
Mouse    75 AEVSKRGASHTLKLANRLYGEKTYNFLPEYLASTQKMYGADLAPV---DFLHASEDARKEINQWV 136

  Fly   143 LDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMSQV 207
            ..||...:.:::....:......|::||.:|||.|:.:|...:|....|.:||.....|.||.|.
Mouse   137 KGQTEGKIPELLSVGVVDSMTKLVLVNAIYFKGMWEEKFMTEDTTDAPFRLSKKDTKTVKMMYQK 201

  Fly   208 GRFKMR--TSTIDQIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQIVLTEM--------- 261
            .:|...  :....:::|:|:....|||||:||||....:.....||.  ||.|.::         
Mouse   202 KKFPFGYISDLKCKVLEMPYQGGELSMVILLPKDIEDESTGLKKIEK--QITLEKLLEWTKRENL 264

  Fly   262 ---DVHVQLPKFKIDFRMELVETLKSMGIQDLFNSS-SDISVLLNQSGTR---ISQVVHKAFIEI 319
               ||||:||:|||:....|...|..:|:||||:|| :|:|   ..||:|   ||::|||:|:|:
Mouse   265 EFIDVHVKLPRFKIEESYTLNSNLGRLGVQDLFSSSKADLS---GMSGSRDLFISKIVHKSFVEV 326

  Fly   320 DEEGGSAGSASASPIRGLSDYATSV--VTFTVNSPFVFMIRDD--DNIYFRGRVVDP 372
            :|||..|.:|:.    |::.:...:  ..|||:.||:|.||.:  .|:.|.|||..|
Mouse   327 NEEGTEAAAATG----GIATFCMLLPEEEFTVDHPFIFFIRHNPTSNVLFLGRVCSP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 113/377 (30%)
Serpinb1aNP_079705.2 serpinB1_LEI 1..379 CDD:381028 115/380 (30%)
CARD-binding motif (CBM). /evidence=ECO:0000250|UniProtKB:P30740 351..379 13/27 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.930

Return to query results.
Submit another query.