DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Da and Serpinb2

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_067728.1 Gene:Serpinb2 / 60325 RGDID:621823 Length:416 Species:Rattus norvegicus


Alignment Length:413 Identity:108/413 - (26%)
Similarity:185/413 - (44%) Gaps:64/413 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNL------------PE- 68
            |...|.:...|.|...||..||..:...::::.:||..||..::...||.            || 
  Rat    11 FALNLLKQIEQSNSTQNIFISPWSISSTLAIVFLGAQANTEEQMAKVLNFDKIGSYDLTPGNPEN 75

  Fly    69 ------------DKKNVATIY----DKL------LTKLERGKKVA--ILHLANRLFVNETIGVNK 109
                        |...||.:.    ||:      |:......::.  :|..||:||..::....:
  Rat    76 FHGCDFAQHIQRDNYPVAILQAQARDKIHSAFSSLSSTINTPRLGDYLLESANKLFGEKSARFKE 140

  Fly   110 RYNKLVNKHFRAEAEAIKLAD-RLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFF 173
            .|.:...|::..|.||:...: ..:|...||.||..||...:.:::....:..|...|::|..:|
  Rat   141 EYIQRCKKYYSTEPEAVDFLECANEARKKINSWVKTQTKGEIPNLLPEGSVDEDTKMVLVNTIYF 205

  Fly   174 KGYWKTRFDKMNTKPKVFYVSKSYQVNVNMM-----SQVGRFK-MRTSTIDQIIELPFAYSNLSM 232
            ||.|||.|.|.......|.|:.:....|.||     ..:|..| ::|    ||:|||: ..|:||
  Rat   206 KGRWKTPFQKRLNGLYPFRVNLNESKPVQMMYLREKLNIGYIKDLKT----QILELPY-IGNISM 265

  Fly   233 VIVLP---KDNGS---LTQAEATIESYPQIV----LTEMDVHVQLPKFKIDFRMELVETLKSMGI 287
            .::||   :|:.:   :.:.|...:::.:.:    |.|.||.|.:||||:....||...|:.||:
  Rat   266 FLLLPDEIEDSSTGLEMLEREINFDNFNKWISKETLDEDDVLVYIPKFKLAQNYELKPILQRMGM 330

  Fly   288 QDLFN-SSSDISVLLNQSGTRISQVVHKAFIEIDEEGGSAGSASASPIRGLSDYATSVVTFTVNS 351
            :|.|| ..:|.|.:...:...:|:|.|:|.::::|||..|...:.:.:.|.:.:...  .|..:.
  Rat   331 EDAFNKGKADFSGMSESNDLFLSEVFHQATVDVNEEGTVAAGGTGAVMTGRTGHGGP--QFVADH 393

  Fly   352 PFVFMIRDD--DNIYFRGRVVDP 372
            ||:|.|.::  ..|.|.||...|
  Rat   394 PFLFFIMNNITRTILFVGRFSSP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 106/408 (26%)
Serpinb2NP_067728.1 serpinB2_PAI-2 2..416 CDD:381029 107/411 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

Return to query results.
Submit another query.