DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Da and serpina7

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_021331940.1 Gene:serpina7 / 564060 ZFINID:ZDB-GENE-041010-47 Length:425 Species:Danio rerio


Alignment Length:377 Identity:90/377 - (23%)
Similarity:178/377 - (47%) Gaps:28/377 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTKQLYRSFLQ--DNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPE---DKKNVATI 76
            |...||:..::  |.:..||..||..|.:.:|.:.:||.|:|..:|.:.:....   ..:.:..:
Zfish    58 FAFHLYKRLIESPDYQSKNIFFSPFSVSMALSELSLGAGGDTKQQLLSGIGYNSAIFSTEEMHQL 122

  Fly    77 YDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAINDW 141
            :..||.::....:|.| .:...|:.::....:.::.:.:.:.:.::...:..:.: :....||.:
Zfish   123 FHSLLEEIGNRTEVDI-DVGTALYASDRFKPHSKFLEDMKEFYHSDGFTVDFSVK-ETVDQINKY 185

  Fly   142 VLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMSQ 206
            |.::|...:...:  .:|..|....::...:|||.|...|....|....||:.....|.|.||.|
Zfish   186 VEEKTHGKISQAV--DNLEKDTLMFLLTYIYFKGKWDKPFKPETTSESTFYIDDKTTVPVQMMHQ 248

  Fly   207 VGRFKM--RTSTIDQIIELPFAYSNLSMVIVLP---------KDNGSLTQAEATIESYPQIVLTE 260
            ....|:  ......:::.|.: ..:.||::.:|         ||. .:|.:...||.:.:.| :|
Zfish   249 YEHLKVYYDVELFTKVLCLDY-NDSFSMILAVPDVYMKQKTMKDL-EMTVSRQHIEKWRRSV-SE 310

  Fly   261 MDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEIDEEGGS 325
            ..|.:.:||..:.....|.:.||.||:.|:|:..:|.:. :::....:|:|:|||.::|||:|.:
Zfish   311 RKVDIYVPKLSLKTSYSLKDILKGMGMTDMFSDKADFTG-VSEENIFVSKVLHKATLDIDEQGTT 374

  Fly   326 AGSASASPIRGLSDYATSVVTFTVNSPFVFMIRD--DDNIYFRGRVVDPLKK 375
            |.:.:...||..|....|.:.|  :.||:..|.|  :|||.|.|:||:|.:|
Zfish   375 AAAVTGVEIRPTSYDPLSDLKF--DHPFMIFITDQTNDNILFVGKVVNPNEK 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 86/369 (23%)
serpina7XP_021331940.1 alpha-1-antitrypsin_like 54..418 CDD:239011 86/369 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.