DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and serpind1

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001015716.1 Gene:serpind1 / 548433 XenbaseID:XB-GENE-6085731 Length:484 Species:Xenopus tropicalis


Alignment Length:380 Identity:98/380 - (25%)
Similarity:175/380 - (46%) Gaps:37/380 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTKQLYRSFLQDNKQY--NIIASPLCVEIGMSMILMGADGNTANELRTALNL-----PEDKKNVA 74
            |...|||: :::|...  ||:.:|:.:...|:.|.:|..|...:::...|..     ...|..:.
 Frog   119 FGFNLYRA-IKNNTDASDNILLAPVGISTAMATISLGTKGQALDQVLFTLGFKNFINASSKYEIL 182

  Fly    75 TIYD---KLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLA--DRLKA 134
            |:::   ||..:|.|......|...|.::|.:...:.:.:...:..::.|||:.:...  |.|..
 Frog   183 TLHNVFRKLTHRLFRRNFGYTLRSVNDIYVKKDFVIREPFKNNLKNYYFAEAQMVDFGSKDFLTK 247

  Fly   135 AWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQV 199
            |   |..:...|...:|:.:  :::.|....:::|..:|||.|:.:|....|:...|.:::...|
 Frog   248 A---NKRIQQLTKGLIKEAL--TNVDPALLMLLVNCIYFKGTWENKFPVEYTQNMNFRLNEKELV 307

  Fly   200 NVNMMSQVGRFKMRTS-TID-QIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQIV----- 257
            .|.||...|.|.:... .:| .:::||:. .|:||:||||.....:...|..|.  ||:|     
 Frog   308 KVPMMKTKGNFLVAADPELDCAVLQLPYV-GNISMLIVLPHKLSGMKLLEKQIS--PQVVERWQN 369

  Fly   258 -LTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEIDE 321
             :|.....|.||:||::....|.|.|.:||:.||| :..|.|. ::.....|....|:..|.::|
 Frog   370 IMTNRTREVFLPRFKLEKSYNLQEVLSNMGVTDLF-THGDFSG-VSDKNMNIGLFQHQGTITVNE 432

  Fly   322 EGGSAGSASASPIRGLSDYATSVVTFTVNSPFVFMIRD--DDNIYFRGRVVDPLK 374
            ||..|.:.:......||..|    .|..:.||:|:|.:  .:.:.|.|||.:|.|
 Frog   433 EGTEAAAVTVVGFMPLSTQA----RFVADRPFLFLIYEHRTNCLIFMGRVANPTK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 94/373 (25%)
serpind1NP_001015716.1 serpinD1_HCF2 38..484 CDD:381004 98/380 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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