DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Da and Spn42Dd

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster


Alignment Length:376 Identity:160/376 - (42%)
Similarity:243/376 - (64%) Gaps:8/376 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKYLCWILVTTSVLGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALN 65
            |.|||..|..|||..|.:|::|:...:.:...|::.||:.:|..:||:.|||:|:||.||::||.
  Fly     1 MYYLCIFLWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALG 65

  Fly    66 LP-EDKKNVATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLA 129
            || |||:.||..|..||..|:..::..||.||||::||:...:|:.||..|.:.|::|||:|.|.
  Fly    66 LPSEDKEAVAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLT 130

  Fly   130 DRLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVS 194
            :...||..||.||||||...:|.:|.|..:|.|..|:::||.:|||.|:::||...|:...|.|:
  Fly   131 NGPVAAERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVT 195

  Fly   195 KSYQVNVNMMSQVGRFKMR-TSTID-QIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQIV 257
            .:..|.|.||:|:|.|:.. ...:| |:||||:..|||||.|.||::...|:..|..|..:.: .
  Fly   196 ANKSVPVQMMAQMGTFRANYFRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALEEKIVGFAR-P 259

  Fly   258 LTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLL-NQSGTRISQVVHKAFIEIDE 321
            |...:|:::||||||:||.||.|||:.:||::||...||:|.|. ::||.::|||.||||:|::|
  Fly   260 LVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLEVNE 324

  Fly   322 EGGSAGSASASPIRGLSDYATSVVTFTVNSPFVFMIRDDDNIYFRGRVVDP 372
            ||..|..|::..:...:.::|.::   .:.||.|:|||.:.|||:||||.|
  Fly   325 EGAEAAGATSVAVTNRAGFSTFLM---ADHPFAFVIRDANTIYFQGRVVSP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 148/356 (42%)
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 148/356 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468699
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
109.900

Return to query results.
Submit another query.