DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Spn88Ea

DIOPT Version :10

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster


Alignment Length:424 Identity:115/424 - (27%)
Similarity:181/424 - (42%) Gaps:76/424 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LCWILVTTSVLGQ----------FTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTAN 58
            ||.:.....:|.|          |...:.....|.....|:..||......:.:...|:.|:|..
  Fly    20 LCGVEPDAGLLDQRLNLYKGQQNFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEK 84

  Fly    59 ELRTALNLP-EDKKNV---ATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNK-RYNKLVNK- 117
            ||...|:|. .|.|.|   |.|.:|:..|..:.|.......|:|:|....:.|.: ..|:|..: 
  Fly    85 ELAKVLHLDWADSKEVVRSAYILEKMNRKERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEV 149

  Fly   118 ---HFRAEAEAIKLADRLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKT 179
               .|:::.|        ::...||||:..||.|.:::::...::||....|:.|||:.||.|.:
  Fly   150 QQIDFKSQTE--------ESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLS 206

  Fly   180 RFDKMNTKPKVFYVSKSYQVNVNMMSQVGRFKMRTSTIDQ-----IIELPF-------------- 225
            :|....|.|..||.|.|....|:||.|.|.|.:   .:|:     :::||:              
  Fly   207 QFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLL---NVDEQLRAHVLQLPYRTVFESQEKEDSSP 268

  Fly   226 -AYSNLSMVIVLPKDNG-------SLTQAEATIESYPQIVLTEMDVHVQLPKFKIDFRMELVETL 282
             ..|::|||::||..|.       |...|::..:|..|.:..|  :.|.||||:.:.|:||...|
  Fly   269 DENSDISMVLILPPFNSNSLEDVLSRLNADSLDDSLKQAMPRE--IEVSLPKFEFEQRLELNPIL 331

  Fly   283 KSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEIDEEGGSAGSA-------SASPIRGLSDY 340
            ..||:..:|:.|......|......|....|.|.|::||||.:|.:|       ||.|:      
  Fly   332 AKMGVSKMFDESVATFDDLTSETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPV------ 390

  Fly   341 ATSVVTFTVNSPFVFMI--RDDDNIYFRGRVVDP 372
              ....|..|.||:|:|  |...:|.|.|...||
  Fly   391 --EPAKFECNHPFLFVIYDRTSRSILFTGIYRDP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 111/414 (27%)
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 109/406 (27%)

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