DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Spn55B

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster


Alignment Length:371 Identity:111/371 - (29%)
Similarity:196/371 - (52%) Gaps:29/371 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTAL----NLPEDKKNVATI 76
            :||.:|::.......:.|::.||..::..:::...|:.|.||:|:..||    |.|.:   ||..
  Fly    14 RFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE---VAQT 75

  Fly    77 YDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAINDW 141
            :..:|.|.....   :|.:||:|:|.|...:...|...:.:.:.:|||:|..|....||.|||.|
  Fly    76 FQFVLEKYRNSN---LLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINAW 137

  Fly   142 VLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMSQ 206
            |..:|...:.:::.....:.:...|::||..|||.|..:|.:..|:..:|:|.:..||.:|.|:|
  Fly   138 VNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQ 202

  Fly   207 VGRFKMRTSTIDQI----IELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQIVLTEM------ 261
            ..:|..  ...:.:    :|:|:..|:|||.::||::.   |...|..|....:.|.::      
  Fly   203 KAKFNY--GFFEDLGCTALEMPYQDSDLSMFVLLPQER---TGIYALAEKLKTVNLVDLADKLTV 262

  Fly   262 -DVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLL-NQSGTRISQVVHKAFIEIDEEGG 324
             :|||:.||||:|:.:||.|.||.:||..:|...::.|.|| :..|..:|:|:|||.||::|||.
  Fly   263 EEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGT 327

  Fly   325 SAGSASASPIRGLSDYATSVVTFTVNSPFVFMIRDDDNIYFRGRVV 370
            .|  |:|:.:..::...|..:.|..:.||:::|.:..||.|.|..|
  Fly   328 EA--AAATGMIMMTRMMTFPLQFQADRPFLYVIWNKKNILFAGAFV 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 110/368 (30%)
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 110/368 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446400
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
98.900

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