DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Spn27A

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster


Alignment Length:383 Identity:105/383 - (27%)
Similarity:182/383 - (47%) Gaps:42/383 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTKQLYRSFLQ-DNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPED---KKNVATIY 77
            |:..|.::.|| :....|:|.||..|::.::::...|...|..::..| |...|   :.||...|
  Fly    76 FSWHLLKTVLQNETADKNVIISPFSVKLVLALLAEAAGAGTQTQVELA-NTQTDIRSQNNVREFY 139

  Fly    78 DKLLTKLERGKKV-AILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAINDW 141
            .|.|...::..:: ..|.:..:||.:..|...:::...:...:.:|.||:...:...||.|||.|
  Fly   140 RKTLNSFKKENQLHETLSVRTKLFTDSFIETQQKFTATLKHFYDSEVEALDFTNPEAAADAINAW 204

  Fly   142 VLDQTLDNVKDIIIPSDLTPDESAVMI--NAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMM 204
            ..:.|...::.::.|.::   .|:||:  |..:|.|.|:.:|  ..|....|:.||..|.....|
  Fly   205 AANITQGRLQQLVAPDNV---RSSVMLLTNLIYFNGLWRRQF--ATTFQGSFFRSKDDQSRAEFM 264

  Fly   205 SQVGRFKMRTS--TIDQIIELPFAYSNLSMVIVLP------------KDNGSLTQAEATIESYPQ 255
            .|...|...||  ...||:.||:...| |:.::||            .:|..|..|:..:|    
  Fly   265 EQTDYFYYTTSEKLKAQILRLPYKGKN-SLFVLLPYALNGIHDLVKNLENDELKSAQWAME---- 324

  Fly   256 IVLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSG----TRISQVVHKAF 316
                |:.|.|.||||..|::..|.|||:|:|::::|..|:.:..|...:.    .::|.::.||.
  Fly   325 ----EVKVKVTLPKFHFDYQQNLKETLRSLGVREIFEDSASLPGLTRGADVAGKVKVSNILQKAG 385

  Fly   317 IEIDEEGGSAGSASASPIRGLSDYATSVVTFTVNSPFVFMIRDDD--NIYFRGRVVDP 372
            |.::|:|..|.:|:...|......:|::..|.||.||||.|.::.  ||.|.|:|..|
  Fly   386 INVNEKGTEAYAATVVEIENKFGGSTAIEEFNVNRPFVFFIEEESTGNILFAGKVHSP 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 103/378 (27%)
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 103/378 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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