DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Spn43Aa

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster


Alignment Length:372 Identity:112/372 - (30%)
Similarity:188/372 - (50%) Gaps:31/372 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTAL--NLPEDKKNVATIYDK 79
            |..:|:::...|.:..|:|.||:.:::.:.:...||:|.||.||:..|  :..|.|..:|..|..
  Fly    30 FATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASAKESKDGLAESYHN 94

  Fly    80 LLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAINDWVLD 144
            ||....:.|  .:|.:||:::..:.:.|:..:.::..|:|.:|.|.:..:...:|...||.||..
  Fly    95 LLHSYIKSK--TVLEIANKVYTRQNLTVSSHFREVAQKYFDSEVEPLDFSRETEAVEQINRWVKQ 157

  Fly   145 QTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNV-NMMSQVG 208
            ||.:.::.::  ..|.||.:..::||.:||..|...|:..:|:.:.|::|:|..:.| .|.:...
  Fly   158 QTENKIERVV--ESLEPDTNVALVNAIYFKARWARPFNDEDTRDREFWLSESRSIQVPTMFADNW 220

  Fly   209 RFKMRTSTID-QIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQIVLTE----MDVHVQLP 268
            .:......:| :.|||.|...||:|..:||.....|...|..::.....:|.:    ..|.|.||
  Fly   221 YYYADYPELDAKAIELFFENINLTMWFILPNQRSGLQALEQKLKGVDFNLLEDRWQWQSVSVYLP 285

  Fly   269 KFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQS--GTRISQVVHKAFIEIDEEGGSAGSASA 331
            |||.:|..:|..||..|||..:|:.::|.|.:...|  ||||::|.||.||:::|.|..|..|| 
  Fly   286 KFKFEFDTDLRPTLHKMGISAMFSDAADFSNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGAS- 349

  Fly   332 SPIRGLSDYATSV--------VTFTVNSPFVFMIRDDDNIYFRGRVV 370
                    ||..|        .||..:.||.|:|||...:||.|.:|
  Fly   350 --------YAAGVPMSLPLDPKTFVADHPFAFIIRDKHAVYFTGHIV 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 111/369 (30%)
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 111/369 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446393
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
98.900

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