DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Spn100A

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster


Alignment Length:637 Identity:99/637 - (15%)
Similarity:189/637 - (29%) Gaps:278/637 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LCWILVTT------------------SVLGQFTKQLYRSFLQDNKQY--NIIASPLCVEIGMSMI 48
            ||.|.||.                  |..||.::.:....|:.||..  |.:.|||.|...::|:
  Fly     5 LCAIFVTLLAAIGQGLPTQLEDENHGSFAGQVSQLIALQLLKFNKDIDANQVHSPLGVASILAML 69

  Fly    49 LMGADGNTANELRTALNLPEDKKNVATIYDKLLTKLE-RGKKVAILHLANRLFVNETIGVNKRYN 112
            ...::|:|.:|.......|:|:..:...|.::|...: |...||:......|::.......:.:.
  Fly    70 AEASEGDTYSEFEQVFGYPKDRTKLRDAYKRILGSYQNRDAAVALPSFQTWLYIYRNNSAREEFK 134

  Fly   113 KLVNKHFRAEAEAIKLADRLKAAWAINDW-------VLDQTLDNV------------KDII---- 154
            .|:.||:..:.:.|...:        .||       .|.:..||.            ||:|    
  Fly   135 DLLEKHYYVDVKDISRQE--------YDWNEPNTSLQLSEEKDNTDSTEGSTEQSNSKDVIGFET 191

  Fly   155 -------------IPSD------------------------------------------------ 158
                         ||||                                                
  Fly   192 LKRIKLDDEDIPAIPSDGYGQEIIDKEASKFDRDVDDKQYVEKPVAQAEAELLQKEQKQQATTES 256

  Fly   159 -----------------LTPD-------------------------------------------- 162
                             ..||                                            
  Fly   257 ELESQPEETTTLSVEKQEKPDMAAEENPAEKQQNKRSDQEESQIKNLEENETVQEEEKLAKIMAA 321

  Fly   163 ------------------ESAV------------------------------------------- 166
                              |:||                                           
  Fly   322 PALTAGEPEKVRLPLQKLENAVKTAAKDGADEIMLALESHLPSVSRVNGARSLFQQDDITSALSA 386

  Fly   167 ---------------MINAAFFKGYWKTRFDKM-NTKPKVFYVSKSYQVNVNMMSQVGRFKMRTS 215
                           :.|..:::|.|...|.:: :...:.|:::....|...||...|:|::  :
  Fly   387 NSITGRSAGSKSKMLLFNGLYYRGSWANPFYQLRDGSDEFFFMTNEDAVKAPMMHARGKFQV--A 449

  Fly   216 TIDQ----IIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQIVLTEM----DVHVQLPKFKI 272
            .:.|    ::.||:..|..::.||||.:...|:...:.:::...::..:.    ::|:.:|||::
  Fly   450 DLPQVKARVLSLPYETSRYALCIVLPDETEGLSDVISQLQTSDFLLAKKQFQMKELHISMPKFQV 514

  Fly   273 DFRMELVETLKSMGIQDLFN-SSSDISVLLNQSGTRISQVVHKAFIEIDEEGGSAGSASASPIRG 336
            :........||.||::.:|: :.:.:|:|.......:.::|....:.:||.|.||.|.||:.::.
  Fly   515 EETSRSEAMLKQMGLKKVFSRTEAQLSLLSEDPDVHVDEIVQFVNVRVDEGGSSANSLSAATMQA 579

  Fly   337 LSDYATSVV--------------TFTVNSPFVFMIRD--DDNIYFRGRVVDP 372
            .:....|.|              .|.||.||.:.|.|  :..:...|::..|
  Fly   580 RTPSVESTVLPVPEPEPELPGVERFEVNRPFAYFIVDCQEQFVLASGKIYTP 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 91/602 (15%)
Spn100ANP_651818.1 SERPIN 41..>148 CDD:294093 23/106 (22%)
SERPIN <380..628 CDD:294093 49/249 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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