DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Spn77Bb

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster


Alignment Length:370 Identity:96/370 - (25%)
Similarity:145/370 - (39%) Gaps:93/370 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GMSMILM---GADGNTANELRTALNLPEDKKNVATIYDKLLTKLERGKKVAILHLAN----RLF- 100
            ||.:::|   ||:|.|.||||..|.:..|...:...|:          .|...|..|    :|| 
  Fly    10 GMVLMIMFYEGAEGYTVNELRDVLGIYVDYPTLRRWYE----------DVRAYHYLNSENTKLFS 64

  Fly   101 ----VNETIG---VNKRYNKLVNKHFRAEAEAIKLADRLKAAWAINDWVLDQTLDNVKDIIIPSD 158
                ..:.:|   :.|.||.:|.:.. .|...:....|.:..          ..|....|||..|
  Fly    65 LRYAYYDDVGDLELVKGYNSVVLEGV-GEGNVVLREGRPRGV----------DFDQGASIIINDD 118

  Fly   159 LTPDESAVM-----------------INAAFFKGYWKTRFDKMNTKPKVFY-VSKSYQVNVNMMS 205
            :.....|.:                 |..::||..||..|||..||.:.|| ...|....|.||.
  Fly   119 IDKASHAKIFSSYSRRSFNSTVTVLGITVSYFKAKWKYPFDKSQTKVEQFYNDGGSPAGKVEMMV 183

  Fly   206 QVGRF----KMRTSTIDQIIELPFAYSNLSMVIVLPKDNGS----------------LTQAEATI 250
            |.|::    .::....| ::||||....|.|:::|||.:..                |.:.||: 
  Fly   184 QTGKYAYVNNVKGLQAD-VLELPFGEHELVMIVLLPKSSQGVNLVLYQLKNLGLHRLLEKLEAS- 246

  Fly   251 ESYPQIVLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTR--ISQVVH 313
                   ..|.||.|:||||.....:.|.:|:...|:.||.|..:|:..||...|.|  ...:.|
  Fly   247 -------KNETDVEVKLPKFDTRSVLSLEDTVYDAGLTDLRNDFADLDKLLIAIGHRGACLTLYH 304

  Fly   314 K-AFIEIDEEGGSAGSASASPIRGLSDYATSVVTFTVNSPFVFMI 357
            : |.|.:|||    |..:|.|.:   ....:.:.|.||.||.:::
  Fly   305 QFARIVVDEE----GLPNAVPQK---SSGKNNIKFHVNRPFAYLV 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 96/370 (26%)
Spn77BbNP_649206.1 SERPIN 13..356 CDD:238101 94/367 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446296
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
54.950

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