DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Serpinb6b

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_038951899.1 Gene:Serpinb6b / 364705 RGDID:1310452 Length:388 Species:Rattus norvegicus


Alignment Length:391 Identity:116/391 - (29%)
Similarity:201/391 - (51%) Gaps:44/391 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDK------KNV 73
            |.|...|.::..:|:.: |::.|||.:..|::|:.|||.|.||:::..||:|  ||      ::|
  Rat     9 GTFAFNLLKTLGEDSSK-NVLFSPLSISSGLAMVFMGAKGTTAHQMIQALSL--DKCSGRGSRDV 70

  Fly    74 ATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAI--KLADRLKAAW 136
            ...:..||.|:.:.....:|..|||||..:|..:...:.....|.:.||.|.:  |.|.. ::..
  Rat    71 HQGFQSLLAKVNKTGTQYLLKTANRLFGEKTFDILASFKDACRKFYEAEMEELDFKGAPE-QSRQ 134

  Fly   137 AINDWVLDQT-----------LDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKV 190
            .||.||..:|           ...:.:::....:..:...|::||.:|||.||.:|:|.:|:...
  Rat   135 HINTWVAKKTEGQSISLNWNSQKKITELLSSGSVNANTPLVLVNAIYFKGNWKKQFNKEDTQEMP 199

  Fly   191 FYVSKSYQVNVNMMSQVGRFKM----RTSTIDQIIELPFAYSNLSMVIVLPKDNGSLTQAEATIE 251
            |.|:|:.:..|.||.:...|||    ..||  .|:.||:..:.|:|:|:||.::..|...|..| 
  Rat   200 FKVTKNEEKPVKMMFKKSTFKMTYVEEIST--TILLLPYVGNELNMIIMLPDEHIELRMVEKEI- 261

  Fly   252 SYPQIV-------LTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSS-SDISVLLNQSGTRI 308
            :|.:.:       :.|.:|.|.|||||::...::.:.|..:|:.|.|... :|.|.:.::.|..:
  Rat   262 TYKKFIEWTSLDKMEEREVEVFLPKFKLEENHDMKDVLHRLGMTDAFEQGMADFSGIASKEGLFL 326

  Fly   309 SQVVHKAFIEIDEEGGSAGSASASPIRGLSDYATSVVTFTVNSPFVFMIRDD--DNIYFRGRVVD 371
            |:|:||:|:|::|||..|.:|:|:.:    .:...|..|..|.||:|.|:..  :.|.|.||...
  Rat   327 SKVIHKSFVEVNEEGTEAAAATAANV----TFRCMVPYFCANHPFLFFIQHSRTNGIVFCGRFSS 387

  Fly   372 P 372
            |
  Rat   388 P 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 113/385 (29%)
Serpinb6bXP_038951899.1 serpin 1..388 CDD:422956 115/389 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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