DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Spn42Dc

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster


Alignment Length:374 Identity:114/374 - (30%)
Similarity:197/374 - (52%) Gaps:20/374 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QFTKQLY----RSFLQDNK--QYNIIASPLCVEIGMSMILMGADGNTANELRTALNL-PEDKKNV 73
            ||.:.|.    :..||.:|  ..|.:.||..|:..:::..|||.|:||.|||..|.| |.|:.::
  Fly    10 QFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPGDRHHI 74

  Fly    74 ATIYDKL-LTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWA 137
            |..:.:. .|....|.:..:|...|||:||:::.:...:|::....|:::|||.:.||...|...
  Fly    75 ALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGATQL 139

  Fly   138 INDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVN 202
            |||||..:|...:.:::....:..:.||::||..:|||.|:..|....|....|:|.:...|.||
  Fly   140 INDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVN 204

  Fly   203 MMSQVGRFKMRTSTIDQI----IELPFAYSNLSMVIVLPKDNGSLTQAEATIESYP----QIVLT 259
            ||.|..:|  |.:.:.|:    ::||:.|||:.|:|:||.:...|.:.|..:.:..    ...||
  Fly   205 MMYQEDKF--RFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAALT 267

  Fly   260 EMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLL-NQSGTRISQVVHKAFIEIDEEG 323
            ..||.:.||:..|::.::|.:.|..:||.::|:..:.:..|. :|||.:||...|:.:|:::|.|
  Fly   268 LQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGYIDVNEAG 332

  Fly   324 GSAGSASASPIRGLSDYATSVVTFTVNSPFVFMIRDDDNIYFRGRVVDP 372
            ..|.:.|...|..:. ...:...|..:.||||.||:...::|.||..:|
  Fly   333 SEAAAVSFMKIVPMM-LNMNKKLFKADHPFVFYIRNPQAVFFAGRFSNP 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 112/369 (30%)
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 112/369 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446401
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
88.000

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