DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Spn42Db

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster


Alignment Length:370 Identity:111/370 - (30%)
Similarity:189/370 - (51%) Gaps:18/370 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMG-ADGN-TANELRTALNLPE-DKKNVAT 75
            |.||...|:....:.:...|||.|||.:.|..:|:.|| ::|: ||.|:...|.... :.:.||.
  Fly    10 LEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEAQQVAE 74

  Fly    76 IYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAIND 140
            .:..:|...|   :..:|.:||.|:|.:.:.|::::..::.:.||::...|..... :||..||.
  Fly    75 SFGVVLKSYE---QCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGSE-QAASIINK 135

  Fly   141 WVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMS 205
            ||..||.:.:||||.|..||.|....::|...|||.|...|::..|:.:.|:.| .....|.||.
  Fly   136 WVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGS-DRPTRVRMMH 199

  Fly   206 QVGRFKMRTSTIDQIIELPFAYS--NLSMVIVLPKDNGSLTQAEATIESYP-QIVLTEMD---VH 264
            ....|......:.:...|...||  ||:|:|:||.:..:||..|..:.... ::|.:.|:   |.
  Fly   200 VCENFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVSSAMNLEKVD 264

  Fly   265 VQLPKFKIDFRMELVETLKSMGIQDLFNSSSDI-SVLLNQSGTRISQVVHKAFIEIDEEGGSAGS 328
            |::|.|..:|:.||.:.|..||:..:|:..::: .:|.::....:||:||||||||:|.|..|.:
  Fly   265 VKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEINEVGTEAAA 329

  Fly   329 ASA--SPIRGLSDYATSVVTFTVNSPFVFMIRDDDN-IYFRGRVV 370
            |:|  :..|.:.........|..|.||.:.|:|:.: :.|.|..:
  Fly   330 ATAAVATFRSMPARQGPPKVFHANRPFFYAIKDNTHGLLFAGHFI 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 110/365 (30%)
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 110/365 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446399
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
88.000

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