DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Spn28B

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster


Alignment Length:379 Identity:138/379 - (36%)
Similarity:221/379 - (58%) Gaps:10/379 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKYLCWILVTTSVLGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALN 65
            ||||..:|:.|||...|.:..||.....|.:.|:|.||:..||.|||:.|.:.|.|..|||..|.
  Fly     1 MKYLYLLLLATSVESGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLK 65

  Fly    66 LPEDKKNVATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLAD 130
            ..|:|..||..|..||:.|:|.:...|||:|||::||:...:...:|:|..|.|:|:|::|:|.|
  Fly    66 FSENKTLVANNYRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDD 130

  Fly   131 RLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSK 195
            .:.|:..:|.|:|::|...:::|::|.|...|.||.::||.:|||.|...|....|....||||.
  Fly   131 PVSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSA 195

  Fly   196 SYQVNVNMMSQVGRFKMRTSTID----QIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQI 256
            :..:.|.||:...  .:.:..||    :|||||:..|.|||.|:||.....|.:.:..: .:...
  Fly   196 NEIIPVKMMTLSA--SLLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEKV-GFIDY 257

  Fly   257 VLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEIDE 321
            .|.:..|:|:||||||:.:.:|....:::||.|:|..|:|::.|:.:||.:|.::|.|||::|||
  Fly   258 HLEKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKAFLKIDE 322

  Fly   322 EGGSAGSASASPIR---GLSDYATSVVTFTVNSPFVFMIRDDDNIYFRGRVVDP 372
            :||.|.:|:....|   .:.:.....:.|..:.||.::|.|:..|||:|.:|:|
  Fly   323 KGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNKVIYFQGHIVEP 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 128/359 (36%)
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 128/358 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468700
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
109.900

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