DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and serpina1

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_017207927.1 Gene:serpina1 / 322701 ZFINID:ZDB-GENE-030131-1421 Length:433 Species:Danio rerio


Alignment Length:386 Identity:102/386 - (26%)
Similarity:188/386 - (48%) Gaps:35/386 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CWILVTTSVLGQFTKQLYRSFLQ--DNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALN-- 65
            |.:|...:  ..|...||:....  |.:..||..||:.:.:.:|::.:||..:|.:::.:.|.  
Zfish    63 CHLLAPHN--ADFAFSLYKKLASNPDGQGKNIFFSPVGISMALSLLAVGAKASTLSQIYSGLGYS 125

  Fly    66 --LPEDKKNVATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKL 128
              .||   .|...|:.||..|...:....|.....:.:.:...|..::.|....::.:||..:..
Zfish   126 ALTPE---QVNEGYEHLLHMLGHSQDAMQLEAGAGVAIRDGFKVVDQFLKDAQHYYNSEAFGVDF 187

  Fly   129 ADRLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYV 193
            :....||..||.::..:|.|.:.:::  .||..|...::||..:|:|.|:..||...|....|.|
Zfish   188 SKPEIAAAEINKFIARKTHDKITNMV--KDLDADTVMMLINYMYFRGKWEKPFDAKLTHKADFKV 250

  Fly   194 SKSYQVNVNMMSQVGRFKMRTSTIDQ--IIELPFAYSNLSMVIVLPKDNGSLTQAEATI------ 250
            .:...|.|:||.:.||:.:....::|  ::.:|:. .|.||:|||| |:|.:.:.|.:|      
Zfish   251 DQDTTVQVDMMKRTGRYDIYQDPVNQTTVMMVPYK-GNTSMMIVLP-DDGKMKELEESICRHHLK 313

  Fly   251 ESYPQIVLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKA 315
            ..:.::..:.:|:.  :|||.|....:|...||.||:.|.||..:|.|.:..:...::|||:|:|
Zfish   314 NWHDKLFRSSVDLF--MPKFSISATSKLDGILKDMGMTDAFNDKADFSGMTEEVKVKVSQVLHQA 376

  Fly   316 FIEIDEEGGSAGSASASPIRGLS--DYATSVVTFTVNSPFVFMIRDDD--NIYFRGRVVDP 372
            .:.:||:|..|.:.:...|..:|  |      |..:|.||:.:|.:|.  :|.|.|::.:|
Zfish   377 VMSVDEKGTEAAAITTIEIMPMSLPD------TVILNRPFLVLIVEDSTMSILFMGKITNP 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 99/370 (27%)
serpina1XP_017207927.1 alpha-1-antitrypsin_like 69..428 CDD:239011 99/375 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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