DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Da and serpinc1

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_878283.1 Gene:serpinc1 / 321545 ZFINID:ZDB-GENE-030131-264 Length:450 Species:Danio rerio


Alignment Length:390 Identity:109/390 - (27%)
Similarity:195/390 - (50%) Gaps:40/390 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QFTKQLYRSFLQ-DNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKK----NVAT 75
            :|...|::...: .:...||..||:.:....:|..:||...|..:|.........|:    .|..
Zfish    72 RFALSLFKQLAEGKSNDENIFLSPISISTAFAMTKLGACNTTLEQLMKVFQFDTIKEKTSDQVHF 136

  Fly    76 IYDKLLTKLERGK-KVAILHLANRLFVNETIGVNKRYN---------KLVNKHFRAEAEAIKLAD 130
            .:.||..:|.|.| :...|..|||||.:::...|:.:.         ||:...|:.:.||.::  
Zfish   137 FFAKLNCRLYRKKHETTELISANRLFGDKSTTFNETFQHISETVYGAKLMPLDFKEKPEASRI-- 199

  Fly   131 RLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSK 195
                  .||:|:.::|.:.:||.:....:..:...|::||.:|||.||.:|||.|.....|:||.
Zfish   200 ------TINEWIANKTENRIKDTLPEGSIDTNTILVLVNAIYFKGQWKNKFDKQNVMKLDFHVSP 258

  Fly   196 SYQVNVNMMSQVGRFKMRTSTID--QIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQI-- 256
            :::..|.||.|..:|:......|  :|:|||:...:::||::||.:..:|::..|.:.....:  
Zfish   259 THKCPVPMMYQEKKFQYAKIPEDKVKILELPYNGGDITMVLILPIEGATLSEVVANMNLKKLVGW 323

  Fly   257 --VLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFN--SSSDISVLLNQSGTR--ISQVVHKA 315
              .:.|..|.||:|:|:::....|.|.|..||::|||:  ::|...::.:..|..  ||...|||
Zfish   324 LHAMKETTVAVQIPRFRVEDSFSLKEQLTKMGLEDLFSPANASLPGMVADAEGPNLFISDAYHKA 388

  Fly   316 FIEIDEEGGSAGSASA--SPIRGLSDYATSVVTFTVNSPFVFMIRDD--DNIYFRGRVVDPLKKS 376
            |:|::|||..|.:|:|  :..|.|:.:...   |..:.||:..||:.  :.:.|.|||.:|.:.|
Zfish   389 FLEVNEEGSEASAATAVVATGRSLNIFREQ---FVADRPFLLFIRESSINALIFTGRVANPCRSS 450

  Fly   377  376
            Zfish   451  450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 105/381 (28%)
serpinc1NP_878283.1 antithrombin-III_like 62..443 CDD:239000 105/381 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.930

Return to query results.
Submit another query.