DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Serpinb12

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_038946584.1 Gene:Serpinb12 / 304692 RGDID:1566382 Length:423 Species:Rattus norvegicus


Alignment Length:419 Identity:110/419 - (26%)
Similarity:195/419 - (46%) Gaps:67/419 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALN---LPEDKKN----- 72
            :|....::...:|:...||...||.:.....|:.:||.|::|.::...|:   ||:|::.     
  Rat    10 KFCFDFFQEISKDDAHKNIFVCPLSLSAAFGMVRLGARGDSAQQIDEVLHFNELPKDERKEPSEP 74

  Fly    73 -----------------------------------VATIYDKLLTKLERGKKVAILHLANRLFVN 102
                                               :...:.|||::::|.|....|.:||||:..
  Rat    75 SSKSKASDSSLEGQKQTTASQGQQVSGESTNEHRLLGCHFGKLLSRIDRDKAHYTLSMANRLYGE 139

  Fly   103 ETIGVNKRYNKLVNKHFRAEAEAIKL-ADRLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAV 166
            :...:...|:..:.:.:....|::.. .|..|:...||.||..|:...:|::.....:......|
  Rat   140 QEFPICPEYSDDITEFYHTTIESVDFQKDTEKSREEINFWVESQSQGKIKELFDKEAIDNSTVLV 204

  Fly   167 MINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMSQVGRFKMRTSTID----QIIELPFAY 227
            ::||.:||..|:..||..||....|.:|::.:..|.||:|.|:|  |...|:    ||:|:.:..
  Rat   205 LVNAVYFKAKWEKEFDSENTVDAPFCLSENEKKTVKMMNQKGQF--RIGFIEELQAQILEMKYTT 267

  Fly   228 SNLSMVIVLP---KDN-GSLTQAEATIE-------SYPQIVLTEMDVHVQLPKFKIDFRMELVET 281
            ..|||:::||   :|| .||.:.|..|.       |.|: .::|..|.:..|:|.::...:|...
  Rat   268 GKLSMLVLLPSSSEDNVKSLQELEKKINHEKLLAWSNPE-NMSEKPVAISFPQFIMEDSYDLNSV 331

  Fly   282 LKSMGIQDLFN-SSSDISVLLNQSGTRISQVVHKAFIEIDEEGGSAGSASASPIRGLSDYATSVV 345
            |:.|||:|:|: :.:|::.:.......:|:||||.|:|:||.|..|.:||.:.:  ......|.|
  Rat   332 LQDMGIRDVFDGTKADLTGISKSPSLHLSKVVHKTFVEVDEMGTQAAAASGAVV--AEKALPSRV 394

  Fly   346 TFTVNSPFVFMIRDD--DNIYFRGRVVDP 372
            .|..|.||:|.||.:  .::.|.|||..|
  Rat   395 EFNANRPFLFFIRHNGTQSLLFCGRVYSP 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 107/414 (26%)
Serpinb12XP_038946584.1 serpinB12_yukopin 1..423 CDD:381037 109/417 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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