DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Serpinb3

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001382662.1 Gene:Serpinb3 / 304688 RGDID:1549766 Length:387 Species:Rattus norvegicus


Alignment Length:382 Identity:111/382 - (29%)
Similarity:194/382 - (50%) Gaps:29/382 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPE------------ 68
            |||.:|||. |:|::. ||..|||.:...::|:.:||.|||..::..||.|.|            
  Rat    10 QFTLELYRQ-LRDSED-NIFYSPLSIMTALAMLQLGAKGNTEKQIEKALQLSETTKKPKEKSADS 72

  Fly    69 -DKKNVATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRL 132
             |::||...:.|::.:|.:......|...|.::..:.....:.:.:.:.|:::|..|::..|...
  Rat    73 HDEENVHEQFRKIMNQLNKSNGAYDLKSPNSIYGAKGFPFLQTFMEDIKKYYQANVESLDFAHAA 137

  Fly   133 KAAW-AINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKS 196
            :.:. .||.||.::|...:||:.....|......|::||.:|||.|..:||:..|:...|:::|:
  Rat   138 EESQKKINSWVENKTNGKIKDLFPRGSLNSSTILVLVNAVYFKGQWNHKFDEQRTREDKFWLNKN 202

  Fly   197 YQVNVNMMSQVGRFK--MRTSTIDQIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQIVLT 259
            ....|.||.|...|.  .......:::|:|:....|||.|:||.:...|.:.|..:.:...:..|
  Rat   203 TSKPVQMMRQTNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEKLSADTLLAWT 267

  Fly   260 E------MDVHVQLPKFKIDFRMELVETLKSMGIQDLFN-SSSDISVLLNQSGTRISQVVHKAFI 317
            .      ..:::.||:||:..:.:|...|:.||:.|.|| ..:|.|.:.:..|..:|:|:||:|:
  Rat   268 SPKNMRMTQLNLSLPRFKVQEKYDLPGPLEHMGMVDAFNPQKADFSGMSSTKGLVVSKVLHKSFL 332

  Fly   318 EIDEEGGSAGSASASPIRGLSDYATSVVTFTVNSPFVFMIR--DDDNIYFRGRVVDP 372
            |::|||..|.:|:....|.||  |.....||.|.||:..|:  :.::|.|.|||..|
  Rat   333 EVNEEGAEAAAATGVETRILS--APRTTEFTCNRPFIVFIKPNNTNSILFFGRVSSP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 108/377 (29%)
Serpinb3NP_001382662.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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