DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Da and Serpina3l

DIOPT Version :10

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_063117839.1 Gene:Serpina3l / 299282 RGDID:3745 Length:655 Species:Rattus norvegicus


Alignment Length:371 Identity:100/371 - (26%)
Similarity:180/371 - (48%) Gaps:25/371 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTAL--NLPE-DKKNVATIYD 78
            |...||:.....|...|::.|||.:...::::.:||..:|..|:...|  ||.| .::.:...:.
  Rat    52 FALSLYKKLALRNPDKNVVFSPLSISAALTILSLGAKDSTMEEILEGLKFNLTEITEEEIHQGFG 116

  Fly    79 KLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAINDWVL 143
            .||.:|.:.:....::..:.||:::...:...:.:.....::|||.........:|...|||:|.
  Rat   117 HLLQRLSQPEDQVEINTGSALFIDKEQPILSEFQEKTRALYQAEAFIADFKQPNEAKKLINDYVS 181

  Fly   144 DQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMM--SQ 206
            :||...:.::.  |||....|.|::|...|||.||..|:..:|....||:.:...|.|.||  .:
  Rat   182 NQTQGKIAELF--SDLEERTSMVLVNYLLFKGKWKVPFNPNDTFESEFYLDEKRSVKVPMMKIKE 244

  Fly   207 VGRFKMRTSTID-QIIELPFAYSNLSMVIVLPKDNGSLTQAEA-----TIESYPQIVLTEMDVHV 265
            |....:|...:. .::||.:. .|.|.:.:|| |.|.:.|.|:     |::.:...::..:...:
  Rat   245 VTTPYVRDEELSCSVLELKYT-GNASALFILP-DQGKMQQVESSLQPETLKKWKDSLIPRIINDL 307

  Fly   266 QLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEIDEEGGSAGSAS 330
            ::|||.|.....|.|.|..:||:.:|:..:|:|.:.......:|||||||.:::||.|..|.:|:
  Rat   308 RMPKFSISTDYSLKEVLPELGIKKVFSQQADLSRITGTKDLYVSQVVHKAVLDVDETGTEATAAT 372

  Fly   331 --ASPIRGLSDYATSVVTFTVNSPFVFMIRDDD--NIYFRGRVVDP 372
              |:.||      ....|...|.||:.:|.|.|  :|.|..::.:|
  Rat   373 GVATVIR------RQPRTLNFNRPFMVVITDMDSQSILFVAKITNP 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 99/369 (27%)
Serpina3lXP_063117839.1 None

Return to query results.
Submit another query.