DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and LOC299277

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_008763124.2 Gene:LOC299277 / 299277 RGDID:1595900 Length:420 Species:Rattus norvegicus


Alignment Length:400 Identity:100/400 - (25%)
Similarity:172/400 - (43%) Gaps:66/400 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SVLGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTAL--NLPEDKK-NV 73
            |:...|...||:.....|...||..|||.:...::.:.:||.|||..|:...|  ||.|..: ::
  Rat    49 SINTDFAFSLYKELALKNPNKNIAFSPLSISAALASLSLGAKGNTLQEILEGLKFNLTETTEIDI 113

  Fly    74 ATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAI 138
            ...|..||.:|.:......:..||.|||.:.:.:...:.:.....::.|..|.......:|...|
  Rat   114 HQNYRDLLQRLSQPGGQGQISRANLLFVEKHLQILNGFKEKAKALYQTEVFATDFQQTCEARKFI 178

  Fly   139 NDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNM 203
            ||:|:.|:...:|:::  ::|....|.||:|...|.|.|...||..:|....|.:.....|.|.|
  Rat   179 NDYVMIQSQGKIKEMV--TELEERTSIVMLNFLLFTGQWSVPFDPDDTFMGKFILDSRRPVKVLM 241

  Fly   204 MSQVGRFKMRTSTI------DQ-----IIELPFAYSNLSMVIVLPKDNGSLTQAEATI------- 250
                    |:|..:      |:     ::||.:.....:| .:|| |.|.:.|.||::       
  Rat   242 --------MKTEDLTTPYFWDEELKCTVVELNYKGHGKAM-FILP-DQGKMEQVEASLHPGTLRK 296

  Fly   251 --ESYPQIVLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVH 313
              :|....::.|:    .||||.:....:|...|..:||.|:||:.:|:|.:......|:||::|
  Rat   297 WTDSLKPRIIDEL----HLPKFSLSKTYKLENILPELGIMDVFNTQADLSGIAGAKDVRVSQMIH 357

  Fly   314 KAFIEIDEEGGSAGSASASPIRGLSDYATSVVTFT-----VNSPFVFMIR---------DDDNIY 364
            ...:.:.|.|..|             .||:.|.:.     :|..||..:|         :.:.|.
  Rat   358 NTVLGMAETGTEA-------------EATTRVEYNFRPAKLNDTFVNFVRKFLYMVLEPNSELIS 409

  Fly   365 FRGRVVDPLK 374
            |..:|::||:
  Rat   410 FMRKVINPLE 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 96/389 (25%)
LOC299277XP_008763124.2 serpinA3_A1AC 37..417 CDD:381019 98/396 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.100

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