DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Serpina3b

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_766612.1 Gene:Serpina3b / 271047 MGIID:2182835 Length:420 Species:Mus musculus


Alignment Length:404 Identity:101/404 - (25%)
Similarity:181/404 - (44%) Gaps:64/404 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVTTSVLGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTAL--NLPE-D 69
            |...|:...|....|:.....|...||..||..:...::.:.:||.|||..|:...|  ||.| .
Mouse    45 LTLASINTDFAFSFYKELALKNPHKNIAFSPFGIATALNSLTLGAKGNTLEEILEVLKFNLTETS 109

  Fly    70 KKNVATIYDKLLTKLER-GKKVAILHLANRLFVNETIGVNKRY---------NKLVNKHFRAEAE 124
            :.::...:..||.:|.. |.:|.| ...|.|||.:.:.:...:         .::...:|:...|
Mouse   110 EADIHQGFKHLLQRLSHPGDQVQI-RTGNALFVEKHLQILAEFKEKARALYHTEVFTANFQQPHE 173

  Fly   125 AIKLADRLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPK 189
            |:||         ||.::.:||...:|:::  ||:..:.|.|::|..|||..|...|:..:|...
Mouse   174 AMKL---------INSYMSNQTQGKIKELV--SDMDGNTSMVIVNDLFFKAEWMVPFNSDDTFMG 227

  Fly   190 VFYVSKSYQVNVNMMSQVGRFKMRTSTI-DQ-----IIELPFAYSNLSMVIVLPKDNGSLTQAEA 248
            .|.|.:|..|.|.||...   .:||... |:     ::||.:. .|...:.:|| |.|.:.|.||
Mouse   228 KFIVDRSRHVKVPMMKTK---NLRTPYFRDEELKCTVVELNYK-GNGKAMFILP-DQGKMQQVEA 287

  Fly   249 -----TIESYPQIVLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRI 308
                 |::.:.:.:.......:.||||.:.....|.:.|..:||::||::.:|:|.:.......:
Mouse   288 SLQPGTLKKWRKSLRPRKIKELHLPKFSLSQHYNLEDILPELGIRELFSTQADLSGITGVKNITV 352

  Fly   309 SQVVHKAFIEIDEEG--GSA--------GSASASPIRGLSDYATSVVTFTVNSPFVFMIRDDDN- 362
            |:::|...:::.|:|  |.|        .||...|:         .|.|  ...|::::.|..: 
Mouse   353 SEMIHSTELDMTEKGTEGDAITIVGYNFMSAKLKPV---------FVKF--EDQFLYIVLDQGDL 406

  Fly   363 -IYFRGRVVDPLKK 375
             |:..|:|::|.:|
Mouse   407 WIHVMGKVINPSEK 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 96/388 (25%)
Serpina3bNP_766612.1 SERPIN 51..414 CDD:294093 96/390 (25%)
RCL 367..392 7/33 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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