DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Da and Serpina4

DIOPT Version :10

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:407 Identity:100/407 - (24%)
Similarity:173/407 - (42%) Gaps:91/407 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANEL-------RTALNLPEDKKNVA 74
            |..:||......|.:.||..|||.:.:.::::..||.|:|..::       .|.|:|||..:...
  Rat    55 FAFRLYHLIASQNSEKNIFFSPLSISVSLAILSTGAGGDTQAQILEGLGFNLTKLSLPEIHEGFR 119

  Fly    75 TIYDKL---LTKLERGKKVAILHLANRLFVNETI-GVNKRYN-KLVNKHFRAEAEAIKLADRLKA 134
            ::...:   .|:.:.....|::...|...::|.: .:...|| |:::.:||.:..|::|      
  Rat   120 SLQHTIARPFTEPQISVGSALILSQNLQILSEFVSAIETSYNSKVLHANFRDKEAAVQL------ 178

  Fly   135 AWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQV 199
               ||::|...|...:|:::  |||:||...|::|..||:|.||..|.........|||.::..|
  Rat   179 ---INNYVKQNTQGKIKNLV--SDLSPDVKMVLVNYIFFQGLWKKPFPSSRVSTSDFYVDENTVV 238

  Fly   200 NVNMMSQ----------------VGRFKMRTSTIDQIIELPFAYSNLSMVIVLPKDNGSLTQAEA 248
            .:.||.|                |.|...|...:              ...:|| |.|.:.:.|.
  Rat   239 KIPMMLQDKEDHWYLEDRRVPCTVLRMDYRGDAV--------------AFFILP-DQGKMNEVEQ 288

  Fly   249 TIES---------------YPQIVLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDIS 298
            .:..               |.:::|       |||||.|....||.|.|..:|.||||..:::.|
  Rat   289 VLSPGMLLRWKRLLQNRFFYRKLIL-------QLPKFSISNSYELDEILPDLGFQDLFTPNANFS 346

  Fly   299 VLLNQSGTRISQVVHKAFIEIDEEGGSAGSASASPIRGLSDYATSVVT------FTVNSPFVFMI 357
            .:..:....:|:|.||..::::|.|..|.:|:.|       :||....      ...|.||:.::
  Rat   347 NISKKEKLYLSKVFHKTVLDVNEVGTKAAAATGS-------FATFFSAQPKKRYLIFNRPFLVIL 404

  Fly   358 --RDDDNIYFRGRVVDP 372
              ....:|.|.|:||:|
  Rat   405 YSTSSQDILFMGKVVNP 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 99/405 (24%)
Serpina4NP_659565.2 serpinA4_KST 41..423 CDD:381020 100/407 (25%)

Return to query results.
Submit another query.